Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp13P33435 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.23■□□□□ 0.51
Mmp13P33435 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Mmp13P33435 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Mmp13P33435 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.23■□□□□ 0.51
Mmp13P33435 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp13P33435 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp13P33435 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp13P33435 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp13P33435 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
Mmp13P33435 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp13P33435 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp13P33435 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp13P33435 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp13P33435 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Mmp13P33435 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.22■□□□□ 0.51
Mmp13P33435 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.22■□□□□ 0.51
Mmp13P33435 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp13P33435 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp13P33435 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp13P33435 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp13P33435 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp13P33435 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp13P33435 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp13P33435 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp13P33435 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.21■□□□□ 0.51
Mmp13P33435 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp13P33435 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp13P33435 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp13P33435 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp13P33435 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.21■□□□□ 0.51
Mmp13P33435 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp13P33435 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp13P33435 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Mmp13P33435 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Mmp13P33435 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.2■□□□□ 0.5
Mmp13P33435 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp13P33435 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp13P33435 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp13P33435 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp13P33435 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.2■□□□□ 0.5
Mmp13P33435 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp13P33435 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp13P33435 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp13P33435 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp13P33435 Gm6211-202ENSMUST00000167849 925 ntBASIC18.2■□□□□ 0.5
Mmp13P33435 Gm5408-201ENSMUST00000197998 747 ntBASIC18.2■□□□□ 0.5
Mmp13P33435 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.2■□□□□ 0.5
Mmp13P33435 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.2■□□□□ 0.5
Mmp13P33435 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp13P33435 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Mmp13P33435 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Mmp13P33435 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp13P33435 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp13P33435 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp13P33435 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp13P33435 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp13P33435 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp13P33435 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp13P33435 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Mmp13P33435 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Mmp13P33435 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.19■□□□□ 0.5
Mmp13P33435 Gm8969-201ENSMUST00000199694 526 ntBASIC18.19■□□□□ 0.5
Mmp13P33435 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Mmp13P33435 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.19■□□□□ 0.5
Mmp13P33435 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp13P33435 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp13P33435 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp13P33435 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp13P33435 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Mmp13P33435 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.19■□□□□ 0.5
Mmp13P33435 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Mmp13P33435 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp13P33435 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp13P33435 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp13P33435 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp13P33435 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp13P33435 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp13P33435 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.18■□□□□ 0.5
Mmp13P33435 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Mmp13P33435 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.18■□□□□ 0.5
Mmp13P33435 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.18■□□□□ 0.5
Mmp13P33435 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Mmp13P33435 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp13P33435 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp13P33435 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Mmp13P33435 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms