Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Rom1P32958 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.14□□□□□ -0.15
Rom1P32958 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.14□□□□□ -0.15
Rom1P32958 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.14□□□□□ -0.15
Rom1P32958 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rom1P32958 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Rom1P32958 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Rom1P32958 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.13□□□□□ -0.15
Rom1P32958 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.13□□□□□ -0.15
Rom1P32958 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rom1P32958 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rom1P32958 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rom1P32958 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rom1P32958 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.12□□□□□ -0.15
Rom1P32958 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rom1P32958 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rom1P32958 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.12□□□□□ -0.15
Rom1P32958 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rom1P32958 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rom1P32958 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rom1P32958 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rom1P32958 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rom1P32958 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.12□□□□□ -0.15
Rom1P32958 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rom1P32958 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.11□□□□□ -0.15
Rom1P32958 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Gm43137-201ENSMUST00000198052 594 ntBASIC14.11□□□□□ -0.15
Rom1P32958 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rom1P32958 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rom1P32958 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rom1P32958 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rom1P32958 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.1□□□□□ -0.15
Rom1P32958 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.1□□□□□ -0.15
Rom1P32958 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.1□□□□□ -0.15
Rom1P32958 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.1□□□□□ -0.15
Rom1P32958 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Haglr-201ENSMUST00000100000 2085 ntBASIC14.1□□□□□ -0.15
Rom1P32958 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rom1P32958 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rom1P32958 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rom1P32958 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms