Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pde6aP27664 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde6aP27664 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde6aP27664 Gm13401-201ENSMUST00000117074 291 ntBASIC20.67■□□□□ 0.9
Pde6aP27664 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
Pde6aP27664 Gm15378-201ENSMUST00000121894 207 ntBASIC20.67■□□□□ 0.9
Pde6aP27664 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pde6aP27664 Gm37292-201ENSMUST00000192062 758 ntBASIC20.67■□□□□ 0.9
Pde6aP27664 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.67■□□□□ 0.9
Pde6aP27664 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.67■□□□□ 0.9
Pde6aP27664 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde6aP27664 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pde6aP27664 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6aP27664 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pde6aP27664 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6aP27664 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pde6aP27664 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6aP27664 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6aP27664 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6aP27664 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6aP27664 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.66■□□□□ 0.9
Pde6aP27664 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6aP27664 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6aP27664 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6aP27664 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6aP27664 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6aP27664 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6aP27664 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6aP27664 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6aP27664 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6aP27664 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6aP27664 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6aP27664 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.65■□□□□ 0.9
Pde6aP27664 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6aP27664 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6aP27664 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Pde6aP27664 Rarb-207ENSMUST00000225921 2756 ntBASIC20.65■□□□□ 0.9
Pde6aP27664 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pde6aP27664 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pde6aP27664 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pde6aP27664 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pde6aP27664 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6aP27664 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6aP27664 Gm11643-201ENSMUST00000119578 864 ntBASIC20.64■□□□□ 0.89
Pde6aP27664 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6aP27664 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6aP27664 Gm43183-201ENSMUST00000200632 547 ntBASIC20.64■□□□□ 0.89
Pde6aP27664 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pde6aP27664 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6aP27664 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6aP27664 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6aP27664 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6aP27664 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.64■□□□□ 0.89
Pde6aP27664 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pde6aP27664 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6aP27664 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
Pde6aP27664 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Pde6aP27664 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.63■□□□□ 0.89
Pde6aP27664 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.63■□□□□ 0.89
Pde6aP27664 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.63■□□□□ 0.89
Pde6aP27664 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Pde6aP27664 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pde6aP27664 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.62■□□□□ 0.89
Pde6aP27664 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6aP27664 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6aP27664 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6aP27664 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.62■□□□□ 0.89
Pde6aP27664 Gm10418-201ENSMUST00000100943 576 ntBASIC20.62■□□□□ 0.89
Pde6aP27664 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pde6aP27664 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pde6aP27664 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pde6aP27664 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pde6aP27664 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.61■□□□□ 0.89
Pde6aP27664 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.61■□□□□ 0.89
Pde6aP27664 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6aP27664 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms