Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Cd40P27512 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.14■□□□□ 0.17
Cd40P27512 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd40P27512 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd40P27512 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd40P27512 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd40P27512 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd40P27512 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd40P27512 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd40P27512 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd40P27512 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd40P27512 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd40P27512 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd40P27512 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd40P27512 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd40P27512 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Cd40P27512 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Cd40P27512 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cd40P27512 Gm10653-202ENSMUST00000139570 835 ntBASIC16.13■□□□□ 0.17
Cd40P27512 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.13■□□□□ 0.17
Cd40P27512 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cd40P27512 Gm29791-202ENSMUST00000207888 369 ntBASIC16.13■□□□□ 0.17
Cd40P27512 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd40P27512 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd40P27512 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cd40P27512 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd40P27512 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cd40P27512 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Cd40P27512 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd40P27512 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd40P27512 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd40P27512 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.12■□□□□ 0.17
Cd40P27512 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cd40P27512 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.12■□□□□ 0.17
Cd40P27512 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd40P27512 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
Cd40P27512 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd40P27512 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd40P27512 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd40P27512 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd40P27512 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd40P27512 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.11■□□□□ 0.17
Cd40P27512 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd40P27512 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cd40P27512 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cd40P27512 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd40P27512 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd40P27512 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd40P27512 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.11■□□□□ 0.17
Cd40P27512 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd40P27512 Gm11643-201ENSMUST00000119578 864 ntBASIC16.11■□□□□ 0.17
Cd40P27512 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cd40P27512 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd40P27512 Idnk-204ENSMUST00000226010 1898 ntBASIC16.11■□□□□ 0.17
Cd40P27512 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cd40P27512 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd40P27512 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.1■□□□□ 0.17
Cd40P27512 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cd40P27512 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.1■□□□□ 0.17
Cd40P27512 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.1■□□□□ 0.17
Cd40P27512 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cd40P27512 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Cd40P27512 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.1■□□□□ 0.17
Cd40P27512 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.1■□□□□ 0.17
Cd40P27512 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.1■□□□□ 0.17
Cd40P27512 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd40P27512 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Cd40P27512 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.09■□□□□ 0.17
Cd40P27512 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.09■□□□□ 0.17
Cd40P27512 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Cd40P27512 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd40P27512 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cd40P27512 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms