Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Irf8P23611 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Irf8P23611 Gm13168-201ENSMUST00000121771 632 ntBASIC19.23■□□□□ 0.67
Irf8P23611 Gm15378-201ENSMUST00000121894 207 ntBASIC19.23■□□□□ 0.67
Irf8P23611 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Gm8969-201ENSMUST00000199694 526 ntBASIC19.23■□□□□ 0.67
Irf8P23611 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.23■□□□□ 0.67
Irf8P23611 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.23■□□□□ 0.67
Irf8P23611 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Irf8P23611 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Irf8P23611 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Irf8P23611 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf8P23611 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Irf8P23611 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf8P23611 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf8P23611 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Irf8P23611 Gm27011-201ENSMUST00000182352 972 ntBASIC19.22■□□□□ 0.67
Irf8P23611 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Irf8P23611 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Irf8P23611 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf8P23611 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf8P23611 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.22■□□□□ 0.67
Irf8P23611 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf8P23611 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Irf8P23611 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Irf8P23611 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf8P23611 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Irf8P23611 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Irf8P23611 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf8P23611 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf8P23611 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf8P23611 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf8P23611 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf8P23611 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf8P23611 Gm42545-201ENSMUST00000202755 922 ntBASIC19.21■□□□□ 0.67
Irf8P23611 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf8P23611 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf8P23611 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf8P23611 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Irf8P23611 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Irf8P23611 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf8P23611 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Irf8P23611 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Irf8P23611 Gm10698-201ENSMUST00000182663 604 ntBASIC19.2■□□□□ 0.66
Irf8P23611 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.2■□□□□ 0.66
Irf8P23611 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.2■□□□□ 0.66
Irf8P23611 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf8P23611 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf8P23611 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf8P23611 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Irf8P23611 Gm13401-201ENSMUST00000117074 291 ntBASIC19.19■□□□□ 0.66
Irf8P23611 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Irf8P23611 Gm37292-201ENSMUST00000192062 758 ntBASIC19.19■□□□□ 0.66
Irf8P23611 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.19■□□□□ 0.66
Irf8P23611 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf8P23611 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Irf8P23611 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf8P23611 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf8P23611 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf8P23611 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf8P23611 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Irf8P23611 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.18■□□□□ 0.66
Irf8P23611 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf8P23611 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf8P23611 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf8P23611 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Irf8P23611 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.18■□□□□ 0.66
Irf8P23611 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf8P23611 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf8P23611 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Irf8P23611 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf8P23611 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf8P23611 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf8P23611 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf8P23611 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf8P23611 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf8P23611 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.17■□□□□ 0.66
Irf8P23611 Gm6576-201ENSMUST00000169678 883 ntBASIC19.17■□□□□ 0.66
Irf8P23611 Mir8112-201ENSMUST00000184382 131 ntBASIC19.17■□□□□ 0.66
Irf8P23611 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Irf8P23611 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms