Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6bP23440 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pde6bP23440 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.39■□□□□ 0.69
Pde6bP23440 Gm10175-202ENSMUST00000208752 441 ntBASIC19.39■□□□□ 0.69
Pde6bP23440 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6bP23440 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6bP23440 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.39■□□□□ 0.69
Pde6bP23440 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6bP23440 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.39■□□□□ 0.69
Pde6bP23440 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pde6bP23440 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6bP23440 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.38■□□□□ 0.69
Pde6bP23440 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pde6bP23440 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Pde6bP23440 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Pde6bP23440 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pde6bP23440 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6bP23440 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pde6bP23440 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pde6bP23440 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Pde6bP23440 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pde6bP23440 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.37■□□□□ 0.69
Pde6bP23440 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6bP23440 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6bP23440 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6bP23440 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6bP23440 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6bP23440 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6bP23440 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.36■□□□□ 0.69
Pde6bP23440 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6bP23440 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6bP23440 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6bP23440 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6bP23440 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.36■□□□□ 0.69
Pde6bP23440 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6bP23440 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6bP23440 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6bP23440 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Pde6bP23440 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6bP23440 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pde6bP23440 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6bP23440 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6bP23440 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6bP23440 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.35■□□□□ 0.69
Pde6bP23440 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.35■□□□□ 0.69
Pde6bP23440 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.35■□□□□ 0.69
Pde6bP23440 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6bP23440 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Pde6bP23440 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6bP23440 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.34■□□□□ 0.69
Pde6bP23440 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6bP23440 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Pde6bP23440 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6bP23440 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.34■□□□□ 0.69
Pde6bP23440 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Pde6bP23440 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.34■□□□□ 0.69
Pde6bP23440 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.34■□□□□ 0.69
Pde6bP23440 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6bP23440 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6bP23440 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Pde6bP23440 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pde6bP23440 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pde6bP23440 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Pde6bP23440 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pde6bP23440 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pde6bP23440 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.33■□□□□ 0.68
Pde6bP23440 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.33■□□□□ 0.68
Pde6bP23440 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6bP23440 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms