Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
BdnfP21237 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.05■□□□□ 0.32
BdnfP21237 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Gm10033-202ENSMUST00000211874 928 ntBASIC17.05■□□□□ 0.32
BdnfP21237 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
BdnfP21237 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
BdnfP21237 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
BdnfP21237 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BdnfP21237 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BdnfP21237 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
BdnfP21237 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
BdnfP21237 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
BdnfP21237 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.04■□□□□ 0.32
BdnfP21237 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.04■□□□□ 0.32
BdnfP21237 Gm42642-201ENSMUST00000200683 355 ntBASIC17.04■□□□□ 0.32
BdnfP21237 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BdnfP21237 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BdnfP21237 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BdnfP21237 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BdnfP21237 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BdnfP21237 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
BdnfP21237 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BdnfP21237 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BdnfP21237 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BdnfP21237 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.03■□□□□ 0.32
BdnfP21237 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.03■□□□□ 0.32
BdnfP21237 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
BdnfP21237 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.03■□□□□ 0.32
BdnfP21237 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.03■□□□□ 0.32
BdnfP21237 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.03■□□□□ 0.32
BdnfP21237 Gm8969-201ENSMUST00000199694 526 ntBASIC17.03■□□□□ 0.32
BdnfP21237 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.03■□□□□ 0.32
BdnfP21237 Gm7514-201ENSMUST00000209475 934 ntBASIC17.03■□□□□ 0.32
BdnfP21237 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.03■□□□□ 0.32
BdnfP21237 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
BdnfP21237 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BdnfP21237 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BdnfP21237 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BdnfP21237 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BdnfP21237 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BdnfP21237 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
BdnfP21237 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.02■□□□□ 0.32
BdnfP21237 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BdnfP21237 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.02■□□□□ 0.32
BdnfP21237 Gm18671-201ENSMUST00000214826 683 ntBASIC17.02■□□□□ 0.32
BdnfP21237 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.02■□□□□ 0.32
BdnfP21237 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.02■□□□□ 0.32
BdnfP21237 Gm5874-201ENSMUST00000096101 508 ntBASIC17.02■□□□□ 0.32
BdnfP21237 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BdnfP21237 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
BdnfP21237 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
BdnfP21237 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
BdnfP21237 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
BdnfP21237 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BdnfP21237 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BdnfP21237 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BdnfP21237 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms