Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Kcna1P16388 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Kcna1P16388 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Kcna1P16388 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcna1P16388 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcna1P16388 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Kcna1P16388 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.23■□□□□ 0.83
Kcna1P16388 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcna1P16388 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.23■□□□□ 0.83
Kcna1P16388 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcna1P16388 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcna1P16388 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Kcna1P16388 Gm715-201ENSMUST00000117865 831 ntBASIC20.23■□□□□ 0.83
Kcna1P16388 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcna1P16388 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Kcna1P16388 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.23■□□□□ 0.83
Kcna1P16388 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.23■□□□□ 0.83
Kcna1P16388 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcna1P16388 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kcna1P16388 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcna1P16388 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Kcna1P16388 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Kcna1P16388 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcna1P16388 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcna1P16388 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.22■□□□□ 0.83
Kcna1P16388 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Kcna1P16388 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Kcna1P16388 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Kcna1P16388 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcna1P16388 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.22■□□□□ 0.83
Kcna1P16388 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcna1P16388 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.22■□□□□ 0.83
Kcna1P16388 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Kcna1P16388 Idnk-204ENSMUST00000226010 1898 ntBASIC20.22■□□□□ 0.83
Kcna1P16388 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kcna1P16388 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.21■□□□□ 0.83
Kcna1P16388 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcna1P16388 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcna1P16388 Gm13401-201ENSMUST00000117074 291 ntBASIC20.21■□□□□ 0.83
Kcna1P16388 Gm12382-201ENSMUST00000122005 922 ntBASIC20.21■□□□□ 0.83
Kcna1P16388 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.21■□□□□ 0.83
Kcna1P16388 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Kcna1P16388 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcna1P16388 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcna1P16388 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.21■□□□□ 0.83
Kcna1P16388 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Kcna1P16388 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcna1P16388 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcna1P16388 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcna1P16388 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kcna1P16388 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 Gm6576-201ENSMUST00000169678 883 ntBASIC20.2■□□□□ 0.82
Kcna1P16388 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.2■□□□□ 0.82
Kcna1P16388 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Kcna1P16388 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.2■□□□□ 0.82
Kcna1P16388 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kcna1P16388 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.19■□□□□ 0.82
Kcna1P16388 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.19■□□□□ 0.82
Kcna1P16388 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.19■□□□□ 0.82
Kcna1P16388 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kcna1P16388 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcna1P16388 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcna1P16388 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcna1P16388 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcna1P16388 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcna1P16388 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcna1P16388 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Kcna1P16388 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Kcna1P16388 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
Kcna1P16388 Gm11643-201ENSMUST00000119578 864 ntBASIC20.18■□□□□ 0.82
Kcna1P16388 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.18■□□□□ 0.82
Kcna1P16388 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.18■□□□□ 0.82
Kcna1P16388 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcna1P16388 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.18■□□□□ 0.82
Kcna1P16388 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.18■□□□□ 0.82
Kcna1P16388 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kcna1P16388 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms