Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Hoxc8P09025 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc8P09025 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.09■□□□□ 0.65
Hoxc8P09025 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc8P09025 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hoxc8P09025 Gm9731-201ENSMUST00000209480 747 ntBASIC19.09■□□□□ 0.65
Hoxc8P09025 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hoxc8P09025 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc8P09025 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hoxc8P09025 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.09■□□□□ 0.65
Hoxc8P09025 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc8P09025 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc8P09025 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc8P09025 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Hoxc8P09025 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc8P09025 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.08■□□□□ 0.64
Hoxc8P09025 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.08■□□□□ 0.64
Hoxc8P09025 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Hoxc8P09025 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.08■□□□□ 0.64
Hoxc8P09025 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.08■□□□□ 0.64
Hoxc8P09025 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc8P09025 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc8P09025 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc8P09025 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc8P09025 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc8P09025 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc8P09025 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Hoxc8P09025 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Hoxc8P09025 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc8P09025 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc8P09025 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc8P09025 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc8P09025 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc8P09025 Mir1668-201ENSMUST00000184114 107 ntBASIC19.07■□□□□ 0.64
Hoxc8P09025 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.07■□□□□ 0.64
Hoxc8P09025 Gm37025-201ENSMUST00000195159 829 ntBASIC19.07■□□□□ 0.64
Hoxc8P09025 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Hoxc8P09025 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Hoxc8P09025 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Hoxc8P09025 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc8P09025 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc8P09025 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc8P09025 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc8P09025 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc8P09025 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc8P09025 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc8P09025 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.06■□□□□ 0.64
Hoxc8P09025 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc8P09025 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc8P09025 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Hoxc8P09025 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Hoxc8P09025 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc8P09025 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc8P09025 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc8P09025 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Hoxc8P09025 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc8P09025 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc8P09025 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc8P09025 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Hoxc8P09025 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc8P09025 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.05■□□□□ 0.64
Hoxc8P09025 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc8P09025 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc8P09025 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc8P09025 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc8P09025 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Hoxc8P09025 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc8P09025 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc8P09025 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.04■□□□□ 0.64
Hoxc8P09025 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc8P09025 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.04■□□□□ 0.64
Hoxc8P09025 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.04■□□□□ 0.64
Hoxc8P09025 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc8P09025 Gm21559-201ENSMUST00000220638 855 ntBASIC19.04■□□□□ 0.64
Hoxc8P09025 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc8P09025 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc8P09025 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc8P09025 Gm8587-201ENSMUST00000076538 843 ntBASIC19.04■□□□□ 0.64
Hoxc8P09025 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc8P09025 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.03■□□□□ 0.64
Hoxc8P09025 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc8P09025 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc8P09025 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.03■□□□□ 0.64
Hoxc8P09025 Gm25016-201ENSMUST00000158399 131 ntBASIC19.03■□□□□ 0.64
Hoxc8P09025 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc8P09025 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc8P09025 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc8P09025 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc8P09025 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc8P09025 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc8P09025 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc8P09025 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxc8P09025 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.02■□□□□ 0.64
Hoxc8P09025 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxc8P09025 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.02■□□□□ 0.64
Hoxc8P09025 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxc8P09025 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.02■□□□□ 0.64
Hoxc8P09025 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.02■□□□□ 0.64
Hoxc8P09025 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxc8P09025 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms