Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TnfP06804 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TnfP06804 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TnfP06804 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TnfP06804 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TnfP06804 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TnfP06804 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TnfP06804 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TnfP06804 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TnfP06804 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TnfP06804 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TnfP06804 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TnfP06804 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TnfP06804 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TnfP06804 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.92■□□□□ 0.62
TnfP06804 Gm3375-201ENSMUST00000203929 796 ntBASIC18.92■□□□□ 0.62
TnfP06804 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.92■□□□□ 0.62
TnfP06804 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.92■□□□□ 0.62
TnfP06804 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.92■□□□□ 0.62
TnfP06804 Gm30025-201ENSMUST00000218555 728 ntBASIC18.92■□□□□ 0.62
TnfP06804 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TnfP06804 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TnfP06804 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TnfP06804 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TnfP06804 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TnfP06804 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TnfP06804 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TnfP06804 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TnfP06804 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TnfP06804 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TnfP06804 Gm12085-201ENSMUST00000119263 940 ntBASIC18.91■□□□□ 0.62
TnfP06804 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.91■□□□□ 0.62
TnfP06804 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TnfP06804 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TnfP06804 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TnfP06804 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TnfP06804 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TnfP06804 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TnfP06804 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TnfP06804 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TnfP06804 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
TnfP06804 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.9■□□□□ 0.62
TnfP06804 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TnfP06804 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.9■□□□□ 0.62
TnfP06804 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TnfP06804 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TnfP06804 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TnfP06804 Gm13836-201ENSMUST00000121159 501 ntBASIC18.9■□□□□ 0.62
TnfP06804 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TnfP06804 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TnfP06804 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TnfP06804 Gm43799-201ENSMUST00000201845 579 ntBASIC18.9■□□□□ 0.62
TnfP06804 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TnfP06804 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TnfP06804 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TnfP06804 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
TnfP06804 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TnfP06804 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TnfP06804 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.89■□□□□ 0.61
TnfP06804 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TnfP06804 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TnfP06804 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TnfP06804 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TnfP06804 Gm10418-201ENSMUST00000100943 576 ntBASIC18.89■□□□□ 0.61
TnfP06804 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TnfP06804 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TnfP06804 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TnfP06804 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TnfP06804 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TnfP06804 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TnfP06804 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TnfP06804 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TnfP06804 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TnfP06804 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TnfP06804 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TnfP06804 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.88■□□□□ 0.61
TnfP06804 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TnfP06804 Gm9987-201ENSMUST00000069768 567 ntBASIC18.88■□□□□ 0.61
TnfP06804 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TnfP06804 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TnfP06804 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TnfP06804 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TnfP06804 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TnfP06804 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TnfP06804 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms