Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna1P04756 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna1P04756 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna1P04756 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.2■□□□□ 0.66
Chrna1P04756 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna1P04756 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Chrna1P04756 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna1P04756 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna1P04756 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna1P04756 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna1P04756 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.19■□□□□ 0.66
Chrna1P04756 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna1P04756 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.19■□□□□ 0.66
Chrna1P04756 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.19■□□□□ 0.66
Chrna1P04756 Gm4974-201ENSMUST00000209974 875 ntBASIC19.19■□□□□ 0.66
Chrna1P04756 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.19■□□□□ 0.66
Chrna1P04756 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.19■□□□□ 0.66
Chrna1P04756 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna1P04756 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chrna1P04756 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna1P04756 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna1P04756 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Chrna1P04756 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.18■□□□□ 0.66
Chrna1P04756 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.18■□□□□ 0.66
Chrna1P04756 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna1P04756 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna1P04756 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna1P04756 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna1P04756 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chrna1P04756 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.18■□□□□ 0.66
Chrna1P04756 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna1P04756 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.18■□□□□ 0.66
Chrna1P04756 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna1P04756 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Chrna1P04756 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna1P04756 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna1P04756 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Chrna1P04756 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna1P04756 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna1P04756 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna1P04756 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chrna1P04756 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Chrna1P04756 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 Gm7889-201ENSMUST00000185591 958 ntBASIC19.17■□□□□ 0.66
Chrna1P04756 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.17■□□□□ 0.66
Chrna1P04756 Gm38027-201ENSMUST00000192315 235 ntBASIC19.17■□□□□ 0.66
Chrna1P04756 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna1P04756 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna1P04756 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna1P04756 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna1P04756 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.16■□□□□ 0.66
Chrna1P04756 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna1P04756 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.16■□□□□ 0.66
Chrna1P04756 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna1P04756 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna1P04756 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna1P04756 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.16■□□□□ 0.66
Chrna1P04756 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna1P04756 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna1P04756 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna1P04756 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.16■□□□□ 0.66
Chrna1P04756 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna1P04756 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna1P04756 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chrna1P04756 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna1P04756 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chrna1P04756 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna1P04756 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Chrna1P04756 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Chrna1P04756 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna1P04756 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna1P04756 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.15■□□□□ 0.66
Chrna1P04756 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.15■□□□□ 0.66
Chrna1P04756 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna1P04756 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna1P04756 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna1P04756 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna1P04756 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna1P04756 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna1P04756 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna1P04756 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chrna1P04756 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna1P04756 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna1P04756 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna1P04756 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.14■□□□□ 0.65
Chrna1P04756 Gm29791-202ENSMUST00000207888 369 ntBASIC19.14■□□□□ 0.65
Chrna1P04756 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Chrna1P04756 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Chrna1P04756 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms