Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col4a1P02463 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col4a1P02463 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Col4a1P02463 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Col4a1P02463 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col4a1P02463 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col4a1P02463 Gm37374-201ENSMUST00000194954 1829 ntBASIC22.06■■□□□ 1.12
Col4a1P02463 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.06■■□□□ 1.12
Col4a1P02463 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col4a1P02463 Gm22697-201ENSMUST00000175194 63 ntBASIC22.06■■□□□ 1.12
Col4a1P02463 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col4a1P02463 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col4a1P02463 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col4a1P02463 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col4a1P02463 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col4a1P02463 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Col4a1P02463 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC22.05■■□□□ 1.12
Col4a1P02463 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col4a1P02463 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col4a1P02463 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col4a1P02463 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC22.05■■□□□ 1.12
Col4a1P02463 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
Col4a1P02463 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Col4a1P02463 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Col4a1P02463 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC22.04■■□□□ 1.12
Col4a1P02463 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col4a1P02463 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.04■■□□□ 1.12
Col4a1P02463 Fst-202ENSMUST00000223640 2612 ntBASIC22.04■■□□□ 1.12
Col4a1P02463 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col4a1P02463 Gm16061-201ENSMUST00000122167 857 ntBASIC22.04■■□□□ 1.12
Col4a1P02463 Gm27741-201ENSMUST00000185060 237 ntBASIC22.04■■□□□ 1.12
Col4a1P02463 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC22.04■■□□□ 1.12
Col4a1P02463 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC22.04■■□□□ 1.12
Col4a1P02463 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 Gm3272-201ENSMUST00000181181 1229 ntBASIC22.03■■□□□ 1.12
Col4a1P02463 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC22.03■■□□□ 1.12
Col4a1P02463 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 Gm10566-201ENSMUST00000086739 996 ntBASIC22.03■■□□□ 1.12
Col4a1P02463 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col4a1P02463 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col4a1P02463 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Col4a1P02463 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col4a1P02463 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC22.02■■□□□ 1.12
Col4a1P02463 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col4a1P02463 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col4a1P02463 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col4a1P02463 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col4a1P02463 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Col4a1P02463 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col4a1P02463 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Col4a1P02463 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col4a1P02463 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col4a1P02463 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col4a1P02463 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Col4a1P02463 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col4a1P02463 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Col4a1P02463 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Col4a1P02463 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col4a1P02463 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col4a1P02463 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col4a1P02463 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC22.01■■□□□ 1.11
Col4a1P02463 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col4a1P02463 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Col4a1P02463 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.01■■□□□ 1.11
Col4a1P02463 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Col4a1P02463 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Col4a1P02463 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC22■■□□□ 1.11
Col4a1P02463 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col4a1P02463 Gm7284-201ENSMUST00000131667 944 ntBASIC22■■□□□ 1.11
Col4a1P02463 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col4a1P02463 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col4a1P02463 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col4a1P02463 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col4a1P02463 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col4a1P02463 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col4a1P02463 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col4a1P02463 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col4a1P02463 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.99■■□□□ 1.11
Col4a1P02463 Gm9731-201ENSMUST00000209480 747 ntBASIC21.99■■□□□ 1.11
Col4a1P02463 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col4a1P02463 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Col4a1P02463 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Col4a1P02463 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.99■■□□□ 1.11
Col4a1P02463 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Col4a1P02463 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col4a1P02463 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col4a1P02463 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col4a1P02463 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col4a1P02463 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Col4a1P02463 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms