Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
P01878 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
P01878 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01878 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01878 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01878 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
P01878 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01878 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.43■□□□□ 0.54
P01878 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.43■□□□□ 0.54
P01878 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01878 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
P01878 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
P01878 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
P01878 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
P01878 Golph3-205ENSMUST00000228671 2842 ntBASIC18.42■□□□□ 0.54
P01878 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01878 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01878 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
P01878 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01878 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P01878 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P01878 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01878 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.42■□□□□ 0.54
P01878 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
P01878 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.42■□□□□ 0.54
P01878 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P01878 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
P01878 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
P01878 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P01878 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01878 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.41■□□□□ 0.54
P01878 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P01878 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01878 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01878 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
P01878 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.41■□□□□ 0.54
P01878 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.41■□□□□ 0.54
P01878 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01878 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01878 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
P01878 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
P01878 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01878 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01878 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
P01878 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
P01878 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
P01878 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01878 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01878 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01878 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.4■□□□□ 0.54
P01878 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
P01878 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
P01878 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
P01878 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
P01878 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
P01878 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
P01878 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01878 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
P01878 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01878 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
P01878 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P01878 AA414768-201ENSMUST00000121924 1257 ntBASIC18.39■□□□□ 0.53
P01878 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01878 Gm7370-201ENSMUST00000219471 767 ntBASIC18.39■□□□□ 0.53
P01878 Gm7367-201ENSMUST00000057611 492 ntBASIC18.39■□□□□ 0.53
P01878 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01878 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01878 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
P01878 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01878 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
P01878 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01878 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01878 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01878 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
P01878 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.38■□□□□ 0.53
P01878 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
P01878 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P01878 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
P01878 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01878 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
P01878 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.38■□□□□ 0.53
P01878 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01878 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01878 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P01878 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01878 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
P01878 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01878 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.37■□□□□ 0.53
P01878 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01878 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P01878 Gm16061-201ENSMUST00000122167 857 ntBASIC18.37■□□□□ 0.53
P01878 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P01878 Gm22697-201ENSMUST00000175194 63 ntBASIC18.37■□□□□ 0.53
P01878 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms