Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Syn1O88935 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syn1O88935 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Syn1O88935 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syn1O88935 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syn1O88935 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syn1O88935 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syn1O88935 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Syn1O88935 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Syn1O88935 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syn1O88935 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syn1O88935 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.32■□□□□ 0.52
Syn1O88935 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Syn1O88935 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Syn1O88935 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Syn1O88935 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.32■□□□□ 0.52
Syn1O88935 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Syn1O88935 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syn1O88935 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.32■□□□□ 0.52
Syn1O88935 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syn1O88935 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Syn1O88935 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Syn1O88935 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syn1O88935 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syn1O88935 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syn1O88935 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Syn1O88935 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syn1O88935 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syn1O88935 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.31■□□□□ 0.52
Syn1O88935 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syn1O88935 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syn1O88935 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syn1O88935 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syn1O88935 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Syn1O88935 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Syn1O88935 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Syn1O88935 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Syn1O88935 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.3■□□□□ 0.52
Syn1O88935 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syn1O88935 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syn1O88935 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Syn1O88935 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syn1O88935 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.3■□□□□ 0.52
Syn1O88935 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syn1O88935 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.3■□□□□ 0.52
Syn1O88935 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syn1O88935 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syn1O88935 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.3■□□□□ 0.52
Syn1O88935 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Syn1O88935 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Syn1O88935 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syn1O88935 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Syn1O88935 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syn1O88935 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syn1O88935 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syn1O88935 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.29■□□□□ 0.52
Syn1O88935 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syn1O88935 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syn1O88935 Gm28659-201ENSMUST00000188013 759 ntBASIC18.29■□□□□ 0.52
Syn1O88935 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syn1O88935 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Syn1O88935 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Syn1O88935 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Syn1O88935 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Syn1O88935 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Syn1O88935 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.28■□□□□ 0.52
Syn1O88935 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Syn1O88935 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Syn1O88935 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Syn1O88935 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Syn1O88935 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.28■□□□□ 0.52
Syn1O88935 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.28■□□□□ 0.52
Syn1O88935 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syn1O88935 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Syn1O88935 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syn1O88935 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syn1O88935 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syn1O88935 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syn1O88935 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syn1O88935 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Syn1O88935 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Syn1O88935 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Syn1O88935 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syn1O88935 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syn1O88935 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Syn1O88935 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syn1O88935 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Syn1O88935 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syn1O88935 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.27■□□□□ 0.52
Syn1O88935 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syn1O88935 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syn1O88935 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Syn1O88935 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syn1O88935 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.27■□□□□ 0.52
Syn1O88935 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Syn1O88935 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Syn1O88935 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syn1O88935 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syn1O88935 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Syn1O88935 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms