Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.49■□□□□ 0.71
Slc6a20bO88575 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.49■□□□□ 0.71
Slc6a20bO88575 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a20bO88575 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.49■□□□□ 0.71
Slc6a20bO88575 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a20bO88575 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a20bO88575 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a20bO88575 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Slc6a20bO88575 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a20bO88575 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Slc6a20bO88575 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Slc6a20bO88575 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Slc6a20bO88575 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Slc6a20bO88575 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a20bO88575 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a20bO88575 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Slc6a20bO88575 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a20bO88575 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.48■□□□□ 0.71
Slc6a20bO88575 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a20bO88575 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.48■□□□□ 0.71
Slc6a20bO88575 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a20bO88575 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a20bO88575 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a20bO88575 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a20bO88575 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a20bO88575 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a20bO88575 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc6a20bO88575 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a20bO88575 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a20bO88575 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a20bO88575 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a20bO88575 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Slc6a20bO88575 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Gm24841-201ENSMUST00000158676 357 ntBASIC19.46■□□□□ 0.71
Slc6a20bO88575 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a20bO88575 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a20bO88575 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Slc6a20bO88575 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a20bO88575 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a20bO88575 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a20bO88575 Gm18958-201ENSMUST00000174258 762 ntBASIC19.45■□□□□ 0.7
Slc6a20bO88575 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc6a20bO88575 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a20bO88575 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a20bO88575 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a20bO88575 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a20bO88575 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a20bO88575 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a20bO88575 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Slc6a20bO88575 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.44■□□□□ 0.7
Slc6a20bO88575 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Gm7213-201ENSMUST00000215977 950 ntBASIC19.44■□□□□ 0.7
Slc6a20bO88575 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a20bO88575 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.44■□□□□ 0.7
Slc6a20bO88575 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Slc6a20bO88575 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc6a20bO88575 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.43■□□□□ 0.7
Slc6a20bO88575 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a20bO88575 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a20bO88575 Gm11355-201ENSMUST00000121120 306 ntBASIC19.43■□□□□ 0.7
Slc6a20bO88575 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Slc6a20bO88575 Mir3081-201ENSMUST00000175305 84 ntBASIC19.43■□□□□ 0.7
Slc6a20bO88575 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Slc6a20bO88575 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Slc6a20bO88575 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Slc6a20bO88575 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.43■□□□□ 0.7
Slc6a20bO88575 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Slc6a20bO88575 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a20bO88575 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Slc6a20bO88575 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a20bO88575 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Slc6a20bO88575 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Slc6a20bO88575 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a20bO88575 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a20bO88575 Mzt1-203ENSMUST00000227948 952 ntBASIC19.42■□□□□ 0.7
Slc6a20bO88575 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.42■□□□□ 0.7
Slc6a20bO88575 Gm5867-201ENSMUST00000063197 592 ntBASIC19.42■□□□□ 0.7
Slc6a20bO88575 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms