Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm12895-201ENSMUST00000122214 226 ntBASIC17.39■□□□□ 0.38
Cacna1hO88427 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cacna1hO88427 Gm37722-201ENSMUST00000193757 208 ntBASIC17.39■□□□□ 0.38
Cacna1hO88427 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1hO88427 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1hO88427 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.39■□□□□ 0.37
Cacna1hO88427 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1hO88427 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1hO88427 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.39■□□□□ 0.37
Cacna1hO88427 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1hO88427 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1hO88427 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cacna1hO88427 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1hO88427 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1hO88427 Gm10418-201ENSMUST00000100943 576 ntBASIC17.38■□□□□ 0.37
Cacna1hO88427 Gm5364-201ENSMUST00000216789 889 ntBASIC17.38■□□□□ 0.37
Cacna1hO88427 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1hO88427 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1hO88427 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.38■□□□□ 0.37
Cacna1hO88427 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1hO88427 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1hO88427 Gm10576-201ENSMUST00000191927 825 ntBASIC17.38■□□□□ 0.37
Cacna1hO88427 Gm43438-201ENSMUST00000198133 379 ntBASIC17.38■□□□□ 0.37
Cacna1hO88427 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.38■□□□□ 0.37
Cacna1hO88427 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1hO88427 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1hO88427 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1hO88427 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1hO88427 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1hO88427 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.37■□□□□ 0.37
Cacna1hO88427 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cacna1hO88427 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cacna1hO88427 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.37■□□□□ 0.37
Cacna1hO88427 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cacna1hO88427 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1hO88427 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1hO88427 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1hO88427 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1hO88427 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1hO88427 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cacna1hO88427 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1hO88427 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1hO88427 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.37■□□□□ 0.37
Cacna1hO88427 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1hO88427 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cacna1hO88427 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cacna1hO88427 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cacna1hO88427 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.36■□□□□ 0.37
Cacna1hO88427 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.36■□□□□ 0.37
Cacna1hO88427 Gm2213-201ENSMUST00000197485 688 ntBASIC17.36■□□□□ 0.37
Cacna1hO88427 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1hO88427 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1hO88427 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1hO88427 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Cacna1hO88427 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.36■□□□□ 0.37
Cacna1hO88427 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cacna1hO88427 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1hO88427 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.36■□□□□ 0.37
Cacna1hO88427 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1hO88427 Gm1401-201ENSMUST00000122048 772 ntBASIC17.36■□□□□ 0.37
Cacna1hO88427 Mir5126-201ENSMUST00000175513 77 ntBASIC17.36■□□□□ 0.37
Cacna1hO88427 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1hO88427 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1hO88427 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.35■□□□□ 0.37
Cacna1hO88427 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1hO88427 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1hO88427 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1hO88427 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.35■□□□□ 0.37
Cacna1hO88427 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cacna1hO88427 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.35■□□□□ 0.37
Cacna1hO88427 Gm8000-201ENSMUST00000188378 592 ntBASIC17.35■□□□□ 0.37
Cacna1hO88427 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1hO88427 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1hO88427 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1hO88427 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1hO88427 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Cacna1hO88427 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1hO88427 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1hO88427 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cacna1hO88427 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cacna1hO88427 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.35■□□□□ 0.37
Cacna1hO88427 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1hO88427 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1hO88427 Mir770-201ENSMUST00000103252 94 ntBASIC17.34■□□□□ 0.37
Cacna1hO88427 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.34■□□□□ 0.37
Cacna1hO88427 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.34■□□□□ 0.37
Cacna1hO88427 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1hO88427 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1hO88427 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1hO88427 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1hO88427 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1hO88427 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1hO88427 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.33■□□□□ 0.37
Cacna1hO88427 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.33■□□□□ 0.37
Cacna1hO88427 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cacna1hO88427 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1hO88427 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.33■□□□□ 0.36
Cacna1hO88427 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1hO88427 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1hO88427 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms