Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Gm22697-201ENSMUST00000175194 63 ntBASIC16.94■□□□□ 0.3
Tgfbr3O88393 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tgfbr3O88393 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.93■□□□□ 0.3
Tgfbr3O88393 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.93■□□□□ 0.3
Tgfbr3O88393 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.93■□□□□ 0.3
Tgfbr3O88393 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tgfbr3O88393 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tgfbr3O88393 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tgfbr3O88393 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Gm27741-201ENSMUST00000185060 237 ntBASIC16.91■□□□□ 0.3
Tgfbr3O88393 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.91■□□□□ 0.3
Tgfbr3O88393 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tgfbr3O88393 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tgfbr3O88393 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.9■□□□□ 0.3
Tgfbr3O88393 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tgfbr3O88393 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tgfbr3O88393 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Tgfbr3O88393 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tgfbr3O88393 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tgfbr3O88393 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tgfbr3O88393 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.89■□□□□ 0.29
Tgfbr3O88393 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tgfbr3O88393 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Tgfbr3O88393 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tgfbr3O88393 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms