Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim3O70209 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim3O70209 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim3O70209 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim3O70209 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.19■□□□□ 0.18
Pdlim3O70209 Gm22325-201ENSMUST00000158904 308 ntBASIC16.19■□□□□ 0.18
Pdlim3O70209 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim3O70209 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim3O70209 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim3O70209 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim3O70209 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pdlim3O70209 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Pdlim3O70209 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim3O70209 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim3O70209 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.18■□□□□ 0.18
Pdlim3O70209 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim3O70209 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim3O70209 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.18■□□□□ 0.18
Pdlim3O70209 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Pdlim3O70209 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Pdlim3O70209 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim3O70209 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdlim3O70209 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.17■□□□□ 0.18
Pdlim3O70209 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Pdlim3O70209 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pdlim3O70209 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pdlim3O70209 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdlim3O70209 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Pdlim3O70209 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pdlim3O70209 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pdlim3O70209 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.16■□□□□ 0.18
Pdlim3O70209 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pdlim3O70209 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.16■□□□□ 0.18
Pdlim3O70209 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.16■□□□□ 0.18
Pdlim3O70209 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdlim3O70209 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.15■□□□□ 0.18
Pdlim3O70209 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pdlim3O70209 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Pdlim3O70209 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.15■□□□□ 0.18
Pdlim3O70209 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pdlim3O70209 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdlim3O70209 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pdlim3O70209 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.14■□□□□ 0.18
Pdlim3O70209 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim3O70209 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim3O70209 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim3O70209 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim3O70209 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim3O70209 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.14■□□□□ 0.17
Pdlim3O70209 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.14■□□□□ 0.17
Pdlim3O70209 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.14■□□□□ 0.17
Pdlim3O70209 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim3O70209 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim3O70209 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim3O70209 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdlim3O70209 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pdlim3O70209 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms