Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prom1O54990 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.71■□□□□ 0.75
Prom1O54990 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.71■□□□□ 0.75
Prom1O54990 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prom1O54990 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prom1O54990 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prom1O54990 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Prom1O54990 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prom1O54990 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.7■□□□□ 0.74
Prom1O54990 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.7■□□□□ 0.74
Prom1O54990 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.7■□□□□ 0.74
Prom1O54990 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Prom1O54990 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Prom1O54990 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prom1O54990 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Prom1O54990 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prom1O54990 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Prom1O54990 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
Prom1O54990 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prom1O54990 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Prom1O54990 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Prom1O54990 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.7■□□□□ 0.74
Prom1O54990 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prom1O54990 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prom1O54990 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prom1O54990 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prom1O54990 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prom1O54990 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Prom1O54990 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prom1O54990 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Prom1O54990 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prom1O54990 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prom1O54990 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prom1O54990 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Prom1O54990 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.69■□□□□ 0.74
Prom1O54990 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prom1O54990 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prom1O54990 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Prom1O54990 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prom1O54990 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Prom1O54990 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prom1O54990 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prom1O54990 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prom1O54990 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Prom1O54990 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prom1O54990 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prom1O54990 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prom1O54990 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prom1O54990 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prom1O54990 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prom1O54990 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Prom1O54990 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prom1O54990 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prom1O54990 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prom1O54990 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prom1O54990 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
Prom1O54990 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.67■□□□□ 0.74
Prom1O54990 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prom1O54990 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prom1O54990 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prom1O54990 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prom1O54990 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Prom1O54990 Fst-202ENSMUST00000223640 2612 ntBASIC19.67■□□□□ 0.74
Prom1O54990 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prom1O54990 Tgds-204ENSMUST00000228543 1594 ntBASIC19.66■□□□□ 0.74
Prom1O54990 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prom1O54990 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prom1O54990 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Prom1O54990 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.66■□□□□ 0.74
Prom1O54990 AA414768-201ENSMUST00000121924 1257 ntBASIC19.66■□□□□ 0.74
Prom1O54990 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Prom1O54990 Gm2274-201ENSMUST00000184539 609 ntBASIC19.66■□□□□ 0.74
Prom1O54990 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prom1O54990 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Prom1O54990 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Prom1O54990 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prom1O54990 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prom1O54990 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prom1O54990 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prom1O54990 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Prom1O54990 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prom1O54990 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prom1O54990 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prom1O54990 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prom1O54990 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prom1O54990 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prom1O54990 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prom1O54990 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prom1O54990 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prom1O54990 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prom1O54990 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prom1O54990 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prom1O54990 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prom1O54990 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.64■□□□□ 0.73
Prom1O54990 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prom1O54990 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prom1O54990 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prom1O54990 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prom1O54990 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prom1O54990 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms