Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.19■□□□□ 0.18
Rnf13O54965 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Rnf13O54965 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.18■□□□□ 0.18
Rnf13O54965 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.18■□□□□ 0.18
Rnf13O54965 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.18■□□□□ 0.18
Rnf13O54965 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Rnf13O54965 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf13O54965 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf13O54965 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf13O54965 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf13O54965 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf13O54965 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.17■□□□□ 0.18
Rnf13O54965 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf13O54965 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Rnf13O54965 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rnf13O54965 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf13O54965 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf13O54965 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf13O54965 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Rnf13O54965 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf13O54965 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rnf13O54965 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf13O54965 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf13O54965 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf13O54965 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf13O54965 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.16■□□□□ 0.18
Rnf13O54965 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.16■□□□□ 0.18
Rnf13O54965 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf13O54965 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rnf13O54965 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf13O54965 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rnf13O54965 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf13O54965 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rnf13O54965 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf13O54965 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf13O54965 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf13O54965 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnf13O54965 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf13O54965 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rnf13O54965 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Rnf13O54965 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf13O54965 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Rnf13O54965 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnf13O54965 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf13O54965 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rnf13O54965 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf13O54965 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnf13O54965 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf13O54965 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf13O54965 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf13O54965 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf13O54965 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf13O54965 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rnf13O54965 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rnf13O54965 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf13O54965 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.14■□□□□ 0.17
Rnf13O54965 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf13O54965 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf13O54965 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf13O54965 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf13O54965 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf13O54965 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf13O54965 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf13O54965 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf13O54965 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf13O54965 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.13■□□□□ 0.17
Rnf13O54965 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf13O54965 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf13O54965 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf13O54965 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.13■□□□□ 0.17
Rnf13O54965 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf13O54965 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms