Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.13■□□□□ 0.49
Banf1O54962 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Banf1O54962 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Banf1O54962 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Banf1O54962 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Banf1O54962 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Banf1O54962 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.13■□□□□ 0.49
Banf1O54962 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Banf1O54962 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Banf1O54962 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.12■□□□□ 0.49
Banf1O54962 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Banf1O54962 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Banf1O54962 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Banf1O54962 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Banf1O54962 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Banf1O54962 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Banf1O54962 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.12■□□□□ 0.49
Banf1O54962 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Banf1O54962 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Banf1O54962 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Banf1O54962 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Banf1O54962 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.12■□□□□ 0.49
Banf1O54962 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Banf1O54962 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Banf1O54962 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Banf1O54962 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Banf1O54962 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Banf1O54962 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Banf1O54962 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Banf1O54962 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Banf1O54962 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Banf1O54962 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Banf1O54962 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Banf1O54962 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.11■□□□□ 0.49
Banf1O54962 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
Banf1O54962 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Banf1O54962 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Banf1O54962 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Banf1O54962 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Banf1O54962 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Banf1O54962 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Banf1O54962 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.11■□□□□ 0.49
Banf1O54962 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Banf1O54962 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Banf1O54962 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.1■□□□□ 0.49
Banf1O54962 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Banf1O54962 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.1■□□□□ 0.49
Banf1O54962 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Banf1O54962 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Banf1O54962 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Banf1O54962 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 AV356131-201ENSMUST00000206201 750 ntBASIC18.09■□□□□ 0.49
Banf1O54962 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.09■□□□□ 0.49
Banf1O54962 Gm5874-201ENSMUST00000096101 508 ntBASIC18.09■□□□□ 0.49
Banf1O54962 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Banf1O54962 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Banf1O54962 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Banf1O54962 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Banf1O54962 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Banf1O54962 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Banf1O54962 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.08■□□□□ 0.48
Banf1O54962 Gm26571-201ENSMUST00000181399 666 ntBASIC18.08■□□□□ 0.48
Banf1O54962 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Banf1O54962 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Banf1O54962 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Banf1O54962 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Banf1O54962 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Banf1O54962 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Banf1O54962 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Banf1O54962 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Banf1O54962 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Banf1O54962 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Banf1O54962 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 158.8 ms