Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ChkaO54804 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ChkaO54804 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ChkaO54804 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ChkaO54804 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ChkaO54804 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ChkaO54804 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ChkaO54804 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ChkaO54804 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.97■□□□□ 0.47
ChkaO54804 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.97■□□□□ 0.47
ChkaO54804 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ChkaO54804 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ChkaO54804 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ChkaO54804 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
ChkaO54804 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ChkaO54804 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ChkaO54804 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ChkaO54804 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ChkaO54804 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ChkaO54804 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ChkaO54804 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ChkaO54804 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.96■□□□□ 0.47
ChkaO54804 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.96■□□□□ 0.47
ChkaO54804 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ChkaO54804 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ChkaO54804 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ChkaO54804 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ChkaO54804 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ChkaO54804 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ChkaO54804 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ChkaO54804 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ChkaO54804 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.95■□□□□ 0.46
ChkaO54804 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ChkaO54804 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ChkaO54804 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ChkaO54804 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ChkaO54804 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.95■□□□□ 0.46
ChkaO54804 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ChkaO54804 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ChkaO54804 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ChkaO54804 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
ChkaO54804 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ChkaO54804 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ChkaO54804 Gm7290-201ENSMUST00000104990 617 ntBASIC17.94■□□□□ 0.46
ChkaO54804 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ChkaO54804 Gm12918-201ENSMUST00000120234 636 ntBASIC17.94■□□□□ 0.46
ChkaO54804 Gm15710-201ENSMUST00000121821 636 ntBASIC17.94■□□□□ 0.46
ChkaO54804 Gm5075-201ENSMUST00000196916 622 ntBASIC17.94■□□□□ 0.46
ChkaO54804 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.94■□□□□ 0.46
ChkaO54804 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.94■□□□□ 0.46
ChkaO54804 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ChkaO54804 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ChkaO54804 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ChkaO54804 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ChkaO54804 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ChkaO54804 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ChkaO54804 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ChkaO54804 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.94■□□□□ 0.46
ChkaO54804 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ChkaO54804 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ChkaO54804 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ChkaO54804 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ChkaO54804 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ChkaO54804 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ChkaO54804 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.93■□□□□ 0.46
ChkaO54804 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ChkaO54804 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ChkaO54804 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.93■□□□□ 0.46
ChkaO54804 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ChkaO54804 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ChkaO54804 Gm13148-201ENSMUST00000118892 745 ntBASIC17.93■□□□□ 0.46
ChkaO54804 Gm37179-201ENSMUST00000194862 823 ntBASIC17.93■□□□□ 0.46
ChkaO54804 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ChkaO54804 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.93■□□□□ 0.46
ChkaO54804 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ChkaO54804 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ChkaO54804 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ChkaO54804 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ChkaO54804 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ChkaO54804 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ChkaO54804 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ChkaO54804 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms