Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc4O35988 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc4O35988 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc4O35988 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc4O35988 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc4O35988 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc4O35988 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sdc4O35988 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Sdc4O35988 Gm11643-201ENSMUST00000119578 864 ntBASIC18.36■□□□□ 0.53
Sdc4O35988 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc4O35988 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Sdc4O35988 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc4O35988 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.36■□□□□ 0.53
Sdc4O35988 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc4O35988 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.36■□□□□ 0.53
Sdc4O35988 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc4O35988 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc4O35988 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc4O35988 Gm5417-201ENSMUST00000079706 384 ntBASIC18.36■□□□□ 0.53
Sdc4O35988 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc4O35988 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc4O35988 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc4O35988 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc4O35988 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sdc4O35988 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc4O35988 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc4O35988 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc4O35988 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc4O35988 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Sdc4O35988 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc4O35988 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc4O35988 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.35■□□□□ 0.53
Sdc4O35988 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.35■□□□□ 0.53
Sdc4O35988 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc4O35988 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc4O35988 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Sdc4O35988 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc4O35988 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc4O35988 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc4O35988 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc4O35988 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc4O35988 Gm15565-201ENSMUST00000118890 427 ntBASIC18.34■□□□□ 0.53
Sdc4O35988 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc4O35988 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.34■□□□□ 0.53
Sdc4O35988 Timm23-208ENSMUST00000226683 750 ntBASIC18.34■□□□□ 0.53
Sdc4O35988 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sdc4O35988 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc4O35988 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc4O35988 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc4O35988 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc4O35988 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc4O35988 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sdc4O35988 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.33■□□□□ 0.53
Sdc4O35988 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdc4O35988 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdc4O35988 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdc4O35988 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.33■□□□□ 0.53
Sdc4O35988 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc4O35988 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc4O35988 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Sdc4O35988 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.33■□□□□ 0.52
Sdc4O35988 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc4O35988 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.33■□□□□ 0.52
Sdc4O35988 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc4O35988 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.33■□□□□ 0.52
Sdc4O35988 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc4O35988 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc4O35988 Tgds-204ENSMUST00000228543 1594 ntBASIC18.33■□□□□ 0.52
Sdc4O35988 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc4O35988 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc4O35988 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc4O35988 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.32■□□□□ 0.52
Sdc4O35988 Gm21814-202ENSMUST00000203277 873 ntBASIC18.32■□□□□ 0.52
Sdc4O35988 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.32■□□□□ 0.52
Sdc4O35988 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.32■□□□□ 0.52
Sdc4O35988 Odf3b-204ENSMUST00000227834 930 ntBASIC18.32■□□□□ 0.52
Sdc4O35988 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc4O35988 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc4O35988 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc4O35988 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sdc4O35988 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc4O35988 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc4O35988 Gm10418-201ENSMUST00000100943 576 ntBASIC18.31■□□□□ 0.52
Sdc4O35988 Gm13836-201ENSMUST00000121159 501 ntBASIC18.31■□□□□ 0.52
Sdc4O35988 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.31■□□□□ 0.52
Sdc4O35988 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms