Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Slc1a4O35874 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a4O35874 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Slc1a4O35874 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a4O35874 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a4O35874 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.9■□□□□ 0.94
Slc1a4O35874 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a4O35874 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc1a4O35874 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc1a4O35874 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc1a4O35874 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Slc1a4O35874 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.89■□□□□ 0.93
Slc1a4O35874 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a4O35874 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Slc1a4O35874 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a4O35874 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.89■□□□□ 0.93
Slc1a4O35874 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Slc1a4O35874 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Slc1a4O35874 Gm37292-201ENSMUST00000192062 758 ntBASIC20.89■□□□□ 0.93
Slc1a4O35874 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Slc1a4O35874 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a4O35874 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a4O35874 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Slc1a4O35874 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a4O35874 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a4O35874 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a4O35874 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a4O35874 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a4O35874 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.89■□□□□ 0.93
Slc1a4O35874 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Slc1a4O35874 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Slc1a4O35874 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a4O35874 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a4O35874 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.88■□□□□ 0.93
Slc1a4O35874 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.88■□□□□ 0.93
Slc1a4O35874 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a4O35874 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Slc1a4O35874 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a4O35874 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Slc1a4O35874 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a4O35874 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Slc1a4O35874 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Slc1a4O35874 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a4O35874 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a4O35874 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a4O35874 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Slc1a4O35874 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.87■□□□□ 0.93
Slc1a4O35874 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.87■□□□□ 0.93
Slc1a4O35874 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.87■□□□□ 0.93
Slc1a4O35874 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.87■□□□□ 0.93
Slc1a4O35874 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc1a4O35874 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc1a4O35874 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc1a4O35874 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc1a4O35874 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc1a4O35874 Fst-202ENSMUST00000223640 2612 ntBASIC20.87■□□□□ 0.93
Slc1a4O35874 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a4O35874 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a4O35874 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a4O35874 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Slc1a4O35874 Gm12382-201ENSMUST00000122005 922 ntBASIC20.86■□□□□ 0.93
Slc1a4O35874 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a4O35874 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a4O35874 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Slc1a4O35874 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a4O35874 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a4O35874 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Slc1a4O35874 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a4O35874 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
Slc1a4O35874 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.85■□□□□ 0.93
Slc1a4O35874 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Slc1a4O35874 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a4O35874 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.84■□□□□ 0.93
Slc1a4O35874 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.84■□□□□ 0.93
Slc1a4O35874 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Gm715-201ENSMUST00000117865 831 ntBASIC20.84■□□□□ 0.93
Slc1a4O35874 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.84■□□□□ 0.93
Slc1a4O35874 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Slc1a4O35874 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Slc1a4O35874 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Slc1a4O35874 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a4O35874 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a4O35874 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.83■□□□□ 0.93
Slc1a4O35874 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a4O35874 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc1a4O35874 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.83■□□□□ 0.93
Slc1a4O35874 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms