Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.6■□□□□ 0.41
Slc1a6O35544 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc1a6O35544 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc1a6O35544 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc1a6O35544 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.6■□□□□ 0.41
Slc1a6O35544 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc1a6O35544 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.59■□□□□ 0.41
Slc1a6O35544 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.59■□□□□ 0.41
Slc1a6O35544 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc1a6O35544 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc1a6O35544 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.59■□□□□ 0.41
Slc1a6O35544 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc1a6O35544 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc1a6O35544 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc1a6O35544 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Slc1a6O35544 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc1a6O35544 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc1a6O35544 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc1a6O35544 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Slc1a6O35544 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc1a6O35544 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc1a6O35544 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc1a6O35544 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc1a6O35544 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc1a6O35544 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc1a6O35544 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc1a6O35544 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc1a6O35544 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc1a6O35544 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Slc1a6O35544 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc1a6O35544 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.58■□□□□ 0.4
Slc1a6O35544 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.58■□□□□ 0.4
Slc1a6O35544 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc1a6O35544 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc1a6O35544 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Slc1a6O35544 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Slc1a6O35544 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc1a6O35544 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.58■□□□□ 0.4
Slc1a6O35544 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Slc1a6O35544 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.57■□□□□ 0.4
Slc1a6O35544 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Slc1a6O35544 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.57■□□□□ 0.4
Slc1a6O35544 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.57■□□□□ 0.4
Slc1a6O35544 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Slc1a6O35544 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Slc1a6O35544 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Slc1a6O35544 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc1a6O35544 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Slc1a6O35544 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a6O35544 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a6O35544 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a6O35544 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a6O35544 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a6O35544 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a6O35544 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a6O35544 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.56■□□□□ 0.4
Slc1a6O35544 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.56■□□□□ 0.4
Slc1a6O35544 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.56■□□□□ 0.4
Slc1a6O35544 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a6O35544 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Slc1a6O35544 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a6O35544 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Slc1a6O35544 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Slc1a6O35544 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.56■□□□□ 0.4
Slc1a6O35544 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a6O35544 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc1a6O35544 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Slc1a6O35544 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Slc1a6O35544 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc1a6O35544 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Slc1a6O35544 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc1a6O35544 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slc1a6O35544 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc1a6O35544 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms