Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
Clcn6O35454 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC18.89■□□□□ 0.61
Clcn6O35454 AC129597.1-201ENSMUST00000223046 1234 ntBASIC18.89■□□□□ 0.61
Clcn6O35454 AC114573.1-201ENSMUST00000224120 1210 ntBASIC18.89■□□□□ 0.61
Clcn6O35454 CT025525.2-201ENSMUST00000227743 423 ntBASIC18.89■□□□□ 0.61
Clcn6O35454 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn6O35454 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn6O35454 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.89■□□□□ 0.61
Clcn6O35454 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn6O35454 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Clcn6O35454 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC18.89■□□□□ 0.61
Clcn6O35454 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn6O35454 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn6O35454 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn6O35454 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn6O35454 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn6O35454 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Clcn6O35454 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.88■□□□□ 0.61
Clcn6O35454 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Clcn6O35454 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.88■□□□□ 0.61
Clcn6O35454 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn6O35454 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn6O35454 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn6O35454 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Clcn6O35454 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn6O35454 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC18.87■□□□□ 0.61
Clcn6O35454 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Clcn6O35454 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.87■□□□□ 0.61
Clcn6O35454 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.87■□□□□ 0.61
Clcn6O35454 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.87■□□□□ 0.61
Clcn6O35454 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn6O35454 Gm43037-201ENSMUST00000196808 250 ntBASIC18.87■□□□□ 0.61
Clcn6O35454 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn6O35454 CT009711.2-202ENSMUST00000224538 973 ntBASIC18.87■□□□□ 0.61
Clcn6O35454 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Clcn6O35454 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn6O35454 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn6O35454 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn6O35454 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn6O35454 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn6O35454 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.86■□□□□ 0.61
Clcn6O35454 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.86■□□□□ 0.61
Clcn6O35454 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn6O35454 Gm13313-201ENSMUST00000118938 1084 ntBASIC18.86■□□□□ 0.61
Clcn6O35454 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.86■□□□□ 0.61
Clcn6O35454 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn6O35454 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.86■□□□□ 0.61
Clcn6O35454 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC18.86■□□□□ 0.61
Clcn6O35454 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.86■□□□□ 0.61
Clcn6O35454 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.86■□□□□ 0.61
Clcn6O35454 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.86■□□□□ 0.61
Clcn6O35454 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.86■□□□□ 0.61
Clcn6O35454 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC18.86■□□□□ 0.61
Clcn6O35454 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.86■□□□□ 0.61
Clcn6O35454 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Clcn6O35454 Gm9988-201ENSMUST00000069786 435 ntBASIC18.86■□□□□ 0.61
Clcn6O35454 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn6O35454 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.86■□□□□ 0.61
Clcn6O35454 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn6O35454 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn6O35454 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn6O35454 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.86■□□□□ 0.61
Clcn6O35454 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn6O35454 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn6O35454 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Clcn6O35454 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.85■□□□□ 0.61
Clcn6O35454 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn6O35454 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn6O35454 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn6O35454 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn6O35454 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.85■□□□□ 0.61
Clcn6O35454 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn6O35454 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Clcn6O35454 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn6O35454 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn6O35454 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn6O35454 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn6O35454 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Clcn6O35454 Reep4-203ENSMUST00000226563 1444 ntBASIC18.84■□□□□ 0.61
Clcn6O35454 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Clcn6O35454 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Clcn6O35454 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn6O35454 Gm29288-201ENSMUST00000191582 901 ntBASIC18.84■□□□□ 0.61
Clcn6O35454 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms