Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cl1O35188 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cl1O35188 Gm13158-201ENSMUST00000122007 736 ntBASIC16.72■□□□□ 0.27
Cx3cl1O35188 Gm8520-201ENSMUST00000186517 868 ntBASIC16.72■□□□□ 0.27
Cx3cl1O35188 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cx3cl1O35188 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cl1O35188 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cl1O35188 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.72■□□□□ 0.27
Cx3cl1O35188 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cx3cl1O35188 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cl1O35188 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cx3cl1O35188 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cl1O35188 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Mtag2-201ENSMUST00000058665 714 ntBASIC16.71■□□□□ 0.27
Cx3cl1O35188 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
Cx3cl1O35188 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.7■□□□□ 0.26
Cx3cl1O35188 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Gm13168-201ENSMUST00000121771 632 ntBASIC16.7■□□□□ 0.26
Cx3cl1O35188 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Gm18666-201ENSMUST00000190039 958 ntBASIC16.7■□□□□ 0.26
Cx3cl1O35188 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cx3cl1O35188 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Tgds-204ENSMUST00000228543 1594 ntBASIC16.69■□□□□ 0.26
Cx3cl1O35188 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Gm5643-201ENSMUST00000117081 966 ntBASIC16.69■□□□□ 0.26
Cx3cl1O35188 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.69■□□□□ 0.26
Cx3cl1O35188 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.69■□□□□ 0.26
Cx3cl1O35188 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cl1O35188 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cl1O35188 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cl1O35188 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cl1O35188 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cl1O35188 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cl1O35188 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cl1O35188 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cl1O35188 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cl1O35188 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cl1O35188 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cl1O35188 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cx3cl1O35188 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cx3cl1O35188 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms