Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Alx4O35137 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.92■□□□□ 0.14
Alx4O35137 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.92■□□□□ 0.14
Alx4O35137 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx4O35137 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx4O35137 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx4O35137 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Alx4O35137 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx4O35137 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Alx4O35137 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.91■□□□□ 0.14
Alx4O35137 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx4O35137 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.91■□□□□ 0.14
Alx4O35137 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Alx4O35137 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx4O35137 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx4O35137 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx4O35137 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx4O35137 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Alx4O35137 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Alx4O35137 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.9■□□□□ 0.14
Alx4O35137 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx4O35137 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Alx4O35137 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx4O35137 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Alx4O35137 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx4O35137 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Alx4O35137 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.9■□□□□ 0.14
Alx4O35137 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Alx4O35137 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.9■□□□□ 0.14
Alx4O35137 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx4O35137 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Alx4O35137 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Alx4O35137 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx4O35137 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx4O35137 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Alx4O35137 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx4O35137 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.89■□□□□ 0.13
Alx4O35137 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.89■□□□□ 0.13
Alx4O35137 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Alx4O35137 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Alx4O35137 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.89■□□□□ 0.13
Alx4O35137 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.89■□□□□ 0.13
Alx4O35137 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.89■□□□□ 0.13
Alx4O35137 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.89■□□□□ 0.13
Alx4O35137 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.89■□□□□ 0.13
Alx4O35137 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alx4O35137 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx4O35137 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Alx4O35137 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.88■□□□□ 0.13
Alx4O35137 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.88■□□□□ 0.13
Alx4O35137 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx4O35137 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Alx4O35137 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx4O35137 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Alx4O35137 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.88■□□□□ 0.13
Alx4O35137 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx4O35137 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Alx4O35137 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx4O35137 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx4O35137 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx4O35137 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Alx4O35137 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Alx4O35137 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx4O35137 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Alx4O35137 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alx4O35137 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx4O35137 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx4O35137 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Alx4O35137 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Alx4O35137 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.87■□□□□ 0.13
Alx4O35137 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.87■□□□□ 0.13
Alx4O35137 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Alx4O35137 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx4O35137 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Alx4O35137 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx4O35137 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx4O35137 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alx4O35137 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alx4O35137 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.86■□□□□ 0.13
Alx4O35137 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Alx4O35137 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.86■□□□□ 0.13
Alx4O35137 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alx4O35137 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alx4O35137 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.86■□□□□ 0.13
Alx4O35137 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alx4O35137 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alx4O35137 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Alx4O35137 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms