Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pkd1O08852 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Pkd1O08852 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.35□□□□□ -0.59
Pkd1O08852 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.35□□□□□ -0.59
Pkd1O08852 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pkd1O08852 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pkd1O08852 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Golph3-202ENSMUST00000226517 2359 ntBASIC11.35□□□□□ -0.59
Pkd1O08852 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Gm26039-201ENSMUST00000158152 144 ntBASIC11.35□□□□□ -0.59
Pkd1O08852 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Pkd1O08852 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pkd1O08852 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pkd1O08852 Gm43347-201ENSMUST00000200226 580 ntBASIC11.35□□□□□ -0.59
Pkd1O08852 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pkd1O08852 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC11.34□□□□□ -0.59
Pkd1O08852 Mir770-201ENSMUST00000103252 94 ntBASIC11.34□□□□□ -0.59
Pkd1O08852 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.34□□□□□ -0.59
Pkd1O08852 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.34□□□□□ -0.59
Pkd1O08852 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.34□□□□□ -0.59
Pkd1O08852 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.34□□□□□ -0.59
Pkd1O08852 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pkd1O08852 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.33□□□□□ -0.6
Pkd1O08852 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pkd1O08852 Gm37722-201ENSMUST00000193757 208 ntBASIC11.33□□□□□ -0.6
Pkd1O08852 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pkd1O08852 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pkd1O08852 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Pkd1O08852 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pkd1O08852 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pkd1O08852 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pkd1O08852 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pkd1O08852 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pkd1O08852 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pkd1O08852 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pkd1O08852 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pkd1O08852 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.33□□□□□ -0.6
Pkd1O08852 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pkd1O08852 Gm13884-201ENSMUST00000118103 829 ntBASIC11.33□□□□□ -0.6
Pkd1O08852 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.33□□□□□ -0.6
Pkd1O08852 Gm5864-201ENSMUST00000202263 970 ntBASIC11.33□□□□□ -0.6
Pkd1O08852 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC11.33□□□□□ -0.6
Pkd1O08852 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pkd1O08852 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pkd1O08852 Gm37935-201ENSMUST00000192012 982 ntBASIC11.32□□□□□ -0.6
Pkd1O08852 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pkd1O08852 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pkd1O08852 Rncr4-201ENSMUST00000194541 2234 ntBASIC11.32□□□□□ -0.6
Pkd1O08852 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pkd1O08852 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pkd1O08852 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pkd1O08852 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Pkd1O08852 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.32□□□□□ -0.6
Pkd1O08852 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.32□□□□□ -0.6
Pkd1O08852 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pkd1O08852 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pkd1O08852 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.32□□□□□ -0.6
Pkd1O08852 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pkd1O08852 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pkd1O08852 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pkd1O08852 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pkd1O08852 Actl10-202ENSMUST00000226583 1501 ntBASIC11.32□□□□□ -0.6
Pkd1O08852 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Pkd1O08852 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.32□□□□□ -0.6
Pkd1O08852 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pkd1O08852 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pkd1O08852 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.31□□□□□ -0.6
Pkd1O08852 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.31□□□□□ -0.6
Pkd1O08852 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pkd1O08852 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pkd1O08852 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pkd1O08852 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pkd1O08852 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pkd1O08852 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pkd1O08852 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.31□□□□□ -0.6
Pkd1O08852 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms