Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3aO08759 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3aO08759 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.29■□□□□ 0.68
Ube3aO08759 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3aO08759 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3aO08759 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3aO08759 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.29■□□□□ 0.68
Ube3aO08759 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ube3aO08759 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3aO08759 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.29■□□□□ 0.68
Ube3aO08759 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3aO08759 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3aO08759 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3aO08759 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ube3aO08759 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ube3aO08759 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ube3aO08759 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube3aO08759 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ube3aO08759 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube3aO08759 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Ube3aO08759 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ube3aO08759 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ube3aO08759 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube3aO08759 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Ube3aO08759 Gm5874-201ENSMUST00000096101 508 ntBASIC19.28■□□□□ 0.68
Ube3aO08759 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube3aO08759 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ube3aO08759 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ube3aO08759 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube3aO08759 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ube3aO08759 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3aO08759 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.27■□□□□ 0.68
Ube3aO08759 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3aO08759 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.27■□□□□ 0.68
Ube3aO08759 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3aO08759 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3aO08759 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3aO08759 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3aO08759 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ube3aO08759 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3aO08759 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Ube3aO08759 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ube3aO08759 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Ube3aO08759 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ube3aO08759 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 Gm13534-201ENSMUST00000121169 513 ntBASIC19.26■□□□□ 0.67
Ube3aO08759 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ube3aO08759 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.26■□□□□ 0.67
Ube3aO08759 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3aO08759 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3aO08759 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3aO08759 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3aO08759 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.25■□□□□ 0.67
Ube3aO08759 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3aO08759 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ube3aO08759 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3aO08759 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ube3aO08759 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3aO08759 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Ube3aO08759 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ube3aO08759 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ube3aO08759 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ube3aO08759 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.24■□□□□ 0.67
Ube3aO08759 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.24■□□□□ 0.67
Ube3aO08759 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Ube3aO08759 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube3aO08759 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3aO08759 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.23■□□□□ 0.67
Ube3aO08759 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3aO08759 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3aO08759 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.23■□□□□ 0.67
Ube3aO08759 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3aO08759 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3aO08759 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube3aO08759 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.23■□□□□ 0.67
Ube3aO08759 Gm22325-201ENSMUST00000158904 308 ntBASIC19.23■□□□□ 0.67
Ube3aO08759 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms