Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp35M0QWN7 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.09■□□□□ 0.65
Usp35M0QWN7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp35M0QWN7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.08■□□□□ 0.65
Usp35M0QWN7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp35M0QWN7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp35M0QWN7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp35M0QWN7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Usp35M0QWN7 Gm715-201ENSMUST00000117865 831 ntBASIC19.08■□□□□ 0.64
Usp35M0QWN7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp35M0QWN7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.08■□□□□ 0.64
Usp35M0QWN7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp35M0QWN7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.08■□□□□ 0.64
Usp35M0QWN7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Usp35M0QWN7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp35M0QWN7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp35M0QWN7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp35M0QWN7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.08■□□□□ 0.64
Usp35M0QWN7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Usp35M0QWN7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.07■□□□□ 0.64
Usp35M0QWN7 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.07■□□□□ 0.64
Usp35M0QWN7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp35M0QWN7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Gm11927-201ENSMUST00000118472 759 ntBASIC19.06■□□□□ 0.64
Usp35M0QWN7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp35M0QWN7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp35M0QWN7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.05■□□□□ 0.64
Usp35M0QWN7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Gm13836-201ENSMUST00000121159 501 ntBASIC19.05■□□□□ 0.64
Usp35M0QWN7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Usp35M0QWN7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Usp35M0QWN7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.04■□□□□ 0.64
Usp35M0QWN7 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.04■□□□□ 0.64
Usp35M0QWN7 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.04■□□□□ 0.64
Usp35M0QWN7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp35M0QWN7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp35M0QWN7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp35M0QWN7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp35M0QWN7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp35M0QWN7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Usp35M0QWN7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp35M0QWN7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp35M0QWN7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms