Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
B020004C17RikJ3QP07 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
B020004C17RikJ3QP07 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
B020004C17RikJ3QP07 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
B020004C17RikJ3QP07 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
B020004C17RikJ3QP07 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
B020004C17RikJ3QP07 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
B020004C17RikJ3QP07 Gm29518-201ENSMUST00000190858 372 ntBASIC19.99■□□□□ 0.79
B020004C17RikJ3QP07 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
B020004C17RikJ3QP07 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
B020004C17RikJ3QP07 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.99■□□□□ 0.79
B020004C17RikJ3QP07 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
B020004C17RikJ3QP07 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.99■□□□□ 0.79
B020004C17RikJ3QP07 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
B020004C17RikJ3QP07 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
B020004C17RikJ3QP07 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
B020004C17RikJ3QP07 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
B020004C17RikJ3QP07 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
B020004C17RikJ3QP07 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
B020004C17RikJ3QP07 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
B020004C17RikJ3QP07 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
B020004C17RikJ3QP07 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
B020004C17RikJ3QP07 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
B020004C17RikJ3QP07 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
B020004C17RikJ3QP07 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
B020004C17RikJ3QP07 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
B020004C17RikJ3QP07 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
B020004C17RikJ3QP07 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
B020004C17RikJ3QP07 Gm17971-201ENSMUST00000190239 806 ntBASIC19.97■□□□□ 0.79
B020004C17RikJ3QP07 Gm7213-201ENSMUST00000215977 950 ntBASIC19.97■□□□□ 0.79
B020004C17RikJ3QP07 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.97■□□□□ 0.79
B020004C17RikJ3QP07 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
B020004C17RikJ3QP07 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
B020004C17RikJ3QP07 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
B020004C17RikJ3QP07 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
B020004C17RikJ3QP07 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
B020004C17RikJ3QP07 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Gm11355-201ENSMUST00000121120 306 ntBASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
B020004C17RikJ3QP07 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
B020004C17RikJ3QP07 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
B020004C17RikJ3QP07 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
B020004C17RikJ3QP07 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
B020004C17RikJ3QP07 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
B020004C17RikJ3QP07 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.93■□□□□ 0.78
B020004C17RikJ3QP07 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
B020004C17RikJ3QP07 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
B020004C17RikJ3QP07 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
B020004C17RikJ3QP07 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.92■□□□□ 0.78
B020004C17RikJ3QP07 Gm17808-201ENSMUST00000200859 894 ntBASIC19.92■□□□□ 0.78
B020004C17RikJ3QP07 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
B020004C17RikJ3QP07 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
B020004C17RikJ3QP07 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
B020004C17RikJ3QP07 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
B020004C17RikJ3QP07 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms