Protein–RNA interactions for Protein: F6VCN9

Gm5861, Predicted gene 5861 (Fragment), mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5861F6VCN9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5861F6VCN9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5861F6VCN9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5861F6VCN9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm5861F6VCN9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5861F6VCN9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5861F6VCN9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Gm5861F6VCN9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5861F6VCN9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5861F6VCN9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm5861F6VCN9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5861F6VCN9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm5861F6VCN9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5861F6VCN9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5861F6VCN9 Gm22325-201ENSMUST00000158904 308 ntBASIC17.11■□□□□ 0.33
Gm5861F6VCN9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5861F6VCN9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.11■□□□□ 0.33
Gm5861F6VCN9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5861F6VCN9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm5861F6VCN9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5861F6VCN9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5861F6VCN9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5861F6VCN9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5861F6VCN9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm5861F6VCN9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5861F6VCN9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5861F6VCN9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm5861F6VCN9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5861F6VCN9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.1■□□□□ 0.33
Gm5861F6VCN9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5861F6VCN9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5861F6VCN9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5861F6VCN9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5861F6VCN9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm5861F6VCN9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5861F6VCN9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Gm5861F6VCN9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5861F6VCN9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5861F6VCN9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5861F6VCN9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm5861F6VCN9 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.09■□□□□ 0.33
Gm5861F6VCN9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5861F6VCN9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5861F6VCN9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5861F6VCN9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5861F6VCN9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.09■□□□□ 0.33
Gm5861F6VCN9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms