Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6F6VAN0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6F6VAN0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf6F6VAN0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf6F6VAN0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Atf6F6VAN0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.3■□□□□ 0.52
Atf6F6VAN0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atf6F6VAN0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.3■□□□□ 0.52
Atf6F6VAN0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.3■□□□□ 0.52
Atf6F6VAN0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.3■□□□□ 0.52
Atf6F6VAN0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.3■□□□□ 0.52
Atf6F6VAN0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Atf6F6VAN0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf6F6VAN0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.3■□□□□ 0.52
Atf6F6VAN0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6F6VAN0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Atf6F6VAN0 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.29■□□□□ 0.52
Atf6F6VAN0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6F6VAN0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6F6VAN0 Gm38285-201ENSMUST00000192928 922 ntBASIC18.29■□□□□ 0.52
Atf6F6VAN0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Atf6F6VAN0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6F6VAN0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6F6VAN0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6F6VAN0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6F6VAN0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6F6VAN0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6F6VAN0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.28■□□□□ 0.52
Atf6F6VAN0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Atf6F6VAN0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.28■□□□□ 0.52
Atf6F6VAN0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6F6VAN0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atf6F6VAN0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Atf6F6VAN0 Flg-201ENSMUST00000050758 1488 ntBASIC18.27■□□□□ 0.52
Atf6F6VAN0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Atf6F6VAN0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atf6F6VAN0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.27■□□□□ 0.52
Atf6F6VAN0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atf6F6VAN0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.27■□□□□ 0.52
Atf6F6VAN0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.27■□□□□ 0.52
Atf6F6VAN0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atf6F6VAN0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atf6F6VAN0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Atf6F6VAN0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atf6F6VAN0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Atf6F6VAN0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Atf6F6VAN0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.26■□□□□ 0.51
Atf6F6VAN0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Zfp783-201ENSMUST00000095946 670 ntBASIC18.26■□□□□ 0.51
Atf6F6VAN0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6F6VAN0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.25■□□□□ 0.51
Atf6F6VAN0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.25■□□□□ 0.51
Atf6F6VAN0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms