Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc141E9Q8Q6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Ccdc141E9Q8Q6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC26.91■■□□□ 1.9
Ccdc141E9Q8Q6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc141E9Q8Q6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
Ccdc141E9Q8Q6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc141E9Q8Q6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC26.91■■□□□ 1.9
Ccdc141E9Q8Q6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 Mir770-201ENSMUST00000103252 94 ntBASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc141E9Q8Q6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ccdc141E9Q8Q6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Ccdc141E9Q8Q6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC26.89■■□□□ 1.9
Ccdc141E9Q8Q6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ccdc141E9Q8Q6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Ccdc141E9Q8Q6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
Ccdc141E9Q8Q6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ccdc141E9Q8Q6 Gm18115-201ENSMUST00000221209 621 ntBASIC26.89■■□□□ 1.89
Ccdc141E9Q8Q6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC26.89■■□□□ 1.89
Ccdc141E9Q8Q6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ccdc141E9Q8Q6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ccdc141E9Q8Q6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ccdc141E9Q8Q6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc141E9Q8Q6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc141E9Q8Q6 Gm26039-201ENSMUST00000158152 144 ntBASIC26.88■■□□□ 1.89
Ccdc141E9Q8Q6 Gm34391-201ENSMUST00000203706 907 ntBASIC26.88■■□□□ 1.89
Ccdc141E9Q8Q6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc141E9Q8Q6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ccdc141E9Q8Q6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC26.88■■□□□ 1.89
Ccdc141E9Q8Q6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc141E9Q8Q6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc141E9Q8Q6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc141E9Q8Q6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc141E9Q8Q6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc141E9Q8Q6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc141E9Q8Q6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Ccdc141E9Q8Q6 Actl10-202ENSMUST00000226583 1501 ntBASIC26.87■■□□□ 1.89
Ccdc141E9Q8Q6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ccdc141E9Q8Q6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc141E9Q8Q6 Gm27742-201ENSMUST00000184667 60 ntBASIC26.86■■□□□ 1.89
Ccdc141E9Q8Q6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc141E9Q8Q6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc141E9Q8Q6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc141E9Q8Q6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ccdc141E9Q8Q6 Gm9885-202ENSMUST00000186234 2209 ntBASIC26.86■■□□□ 1.89
Ccdc141E9Q8Q6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc141E9Q8Q6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC26.85■■□□□ 1.89
Ccdc141E9Q8Q6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC26.85■■□□□ 1.89
Ccdc141E9Q8Q6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC26.85■■□□□ 1.89
Ccdc141E9Q8Q6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc141E9Q8Q6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc141E9Q8Q6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc141E9Q8Q6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc141E9Q8Q6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc141E9Q8Q6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC26.85■■□□□ 1.89
Ccdc141E9Q8Q6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Ccdc141E9Q8Q6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ccdc141E9Q8Q6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc141E9Q8Q6 Gm42922-201ENSMUST00000195887 2078 ntBASIC26.84■■□□□ 1.89
Ccdc141E9Q8Q6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc141E9Q8Q6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc141E9Q8Q6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc141E9Q8Q6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc141E9Q8Q6 Mzt1-203ENSMUST00000227948 952 ntBASIC26.84■■□□□ 1.89
Ccdc141E9Q8Q6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc141E9Q8Q6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc141E9Q8Q6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ccdc141E9Q8Q6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.89
Ccdc141E9Q8Q6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ccdc141E9Q8Q6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ccdc141E9Q8Q6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC26.83■■□□□ 1.89
Ccdc141E9Q8Q6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
Ccdc141E9Q8Q6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Ccdc141E9Q8Q6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ccdc141E9Q8Q6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC26.83■■□□□ 1.89
Ccdc141E9Q8Q6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Ccdc141E9Q8Q6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms