Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.08■□□□□ 0.01
Cpsf4lE9Q2N0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Mir6349-201ENSMUST00000184059 97 ntBASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cpsf4lE9Q2N0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Gm20760-201ENSMUST00000179197 648 ntBASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpsf4lE9Q2N0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Gm5643-201ENSMUST00000117081 966 ntBASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Gm27011-201ENSMUST00000182352 972 ntBASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Gm18666-201ENSMUST00000190039 958 ntBASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf4lE9Q2N0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf4lE9Q2N0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cpsf4lE9Q2N0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Cpsf4lE9Q2N0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cpsf4lE9Q2N0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Cpsf4lE9Q2N0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf4lE9Q2N0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cpsf4lE9Q2N0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf4lE9Q2N0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4lE9Q2N0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.05■□□□□ -0
Cpsf4lE9Q2N0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4lE9Q2N0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Cpsf4lE9Q2N0 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.05■□□□□ -0
Cpsf4lE9Q2N0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4lE9Q2N0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf4lE9Q2N0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf4lE9Q2N0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms