Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-2D3Z4R4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Gm7143-201ENSMUST00000222811 859 ntBASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nkx6-2D3Z4R4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-2D3Z4R4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-2D3Z4R4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-2D3Z4R4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-2D3Z4R4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-2D3Z4R4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-2D3Z4R4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Nkx6-2D3Z4R4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-2D3Z4R4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-2D3Z4R4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-2D3Z4R4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.52□□□□□ -0.09
Nkx6-2D3Z4R4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nkx6-2D3Z4R4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Nkx6-2D3Z4R4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms