Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx8D3YU81 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx8D3YU81 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx8D3YU81 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.88■□□□□ 0.61
Rfx8D3YU81 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Gm12527-201ENSMUST00000117967 564 ntBASIC18.87■□□□□ 0.61
Rfx8D3YU81 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rfx8D3YU81 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.86■□□□□ 0.61
Rfx8D3YU81 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rfx8D3YU81 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx8D3YU81 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx8D3YU81 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.85■□□□□ 0.61
Rfx8D3YU81 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.85■□□□□ 0.61
Rfx8D3YU81 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx8D3YU81 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx8D3YU81 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rfx8D3YU81 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx8D3YU81 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rfx8D3YU81 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx8D3YU81 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx8D3YU81 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Trmt13-210ENSMUST00000198454 880 ntBASIC18.84■□□□□ 0.61
Rfx8D3YU81 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx8D3YU81 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx8D3YU81 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx8D3YU81 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx8D3YU81 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx8D3YU81 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.83■□□□□ 0.61
Rfx8D3YU81 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx8D3YU81 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx8D3YU81 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.83■□□□□ 0.61
Rfx8D3YU81 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rfx8D3YU81 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx8D3YU81 Gm37856-201ENSMUST00000191634 999 ntBASIC18.83■□□□□ 0.6
Rfx8D3YU81 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx8D3YU81 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx8D3YU81 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx8D3YU81 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx8D3YU81 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx8D3YU81 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rfx8D3YU81 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rfx8D3YU81 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Gm11249-201ENSMUST00000117071 859 ntBASIC18.82■□□□□ 0.6
Rfx8D3YU81 Gm20760-201ENSMUST00000179197 648 ntBASIC18.82■□□□□ 0.6
Rfx8D3YU81 Gm27275-201ENSMUST00000184318 272 ntBASIC18.82■□□□□ 0.6
Rfx8D3YU81 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.82■□□□□ 0.6
Rfx8D3YU81 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rfx8D3YU81 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms