Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clrn2B2RVW2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clrn2B2RVW2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clrn2B2RVW2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clrn2B2RVW2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Gm13401-201ENSMUST00000117074 291 ntBASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Gm27741-201ENSMUST00000185060 237 ntBASIC20.65■□□□□ 0.9
Clrn2B2RVW2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Clrn2B2RVW2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Clrn2B2RVW2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clrn2B2RVW2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Clrn2B2RVW2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clrn2B2RVW2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clrn2B2RVW2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clrn2B2RVW2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clrn2B2RVW2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clrn2B2RVW2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clrn2B2RVW2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clrn2B2RVW2 Gm7791-201ENSMUST00000219066 539 ntBASIC20.64■□□□□ 0.89
Clrn2B2RVW2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clrn2B2RVW2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.64■□□□□ 0.89
Clrn2B2RVW2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clrn2B2RVW2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Clrn2B2RVW2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Gm7638-201ENSMUST00000121348 967 ntBASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clrn2B2RVW2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clrn2B2RVW2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn2B2RVW2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.61■□□□□ 0.89
Clrn2B2RVW2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn2B2RVW2 Gm14859-201ENSMUST00000117752 357 ntBASIC20.61■□□□□ 0.89
Clrn2B2RVW2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn2B2RVW2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn2B2RVW2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn2B2RVW2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn2B2RVW2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn2B2RVW2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn2B2RVW2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn2B2RVW2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clrn2B2RVW2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Notumos-201ENSMUST00000151998 2659 ntBASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Gm16061-201ENSMUST00000122167 857 ntBASIC20.6■□□□□ 0.89
Clrn2B2RVW2 Gm24841-201ENSMUST00000158676 357 ntBASIC20.6■□□□□ 0.89
Clrn2B2RVW2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms