Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp42B2RQC2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp42B2RQC2 Gm10418-201ENSMUST00000100943 576 ntBASIC20.87■□□□□ 0.93
Usp42B2RQC2 Gm13401-201ENSMUST00000117074 291 ntBASIC20.87■□□□□ 0.93
Usp42B2RQC2 Gm11643-201ENSMUST00000119578 864 ntBASIC20.87■□□□□ 0.93
Usp42B2RQC2 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.87■□□□□ 0.93
Usp42B2RQC2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp42B2RQC2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Usp42B2RQC2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Usp42B2RQC2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.86■□□□□ 0.93
Usp42B2RQC2 Gm8520-201ENSMUST00000186517 868 ntBASIC20.86■□□□□ 0.93
Usp42B2RQC2 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.86■□□□□ 0.93
Usp42B2RQC2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Usp42B2RQC2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp42B2RQC2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp42B2RQC2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp42B2RQC2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.86■□□□□ 0.93
Usp42B2RQC2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Usp42B2RQC2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp42B2RQC2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp42B2RQC2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp42B2RQC2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp42B2RQC2 Gm37292-201ENSMUST00000192062 758 ntBASIC20.85■□□□□ 0.93
Usp42B2RQC2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Usp42B2RQC2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp42B2RQC2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp42B2RQC2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
Usp42B2RQC2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp42B2RQC2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp42B2RQC2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp42B2RQC2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Usp42B2RQC2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp42B2RQC2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp42B2RQC2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.84■□□□□ 0.93
Usp42B2RQC2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp42B2RQC2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp42B2RQC2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp42B2RQC2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.84■□□□□ 0.93
Usp42B2RQC2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp42B2RQC2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp42B2RQC2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp42B2RQC2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.83■□□□□ 0.93
Usp42B2RQC2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp42B2RQC2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp42B2RQC2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp42B2RQC2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp42B2RQC2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Usp42B2RQC2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp42B2RQC2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp42B2RQC2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp42B2RQC2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp42B2RQC2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp42B2RQC2 Gm15378-201ENSMUST00000121894 207 ntBASIC20.82■□□□□ 0.92
Usp42B2RQC2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp42B2RQC2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.82■□□□□ 0.92
Usp42B2RQC2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp42B2RQC2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp42B2RQC2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp42B2RQC2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp42B2RQC2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp42B2RQC2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Usp42B2RQC2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp42B2RQC2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.81■□□□□ 0.92
Usp42B2RQC2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.81■□□□□ 0.92
Usp42B2RQC2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Usp42B2RQC2 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.81■□□□□ 0.92
Usp42B2RQC2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp42B2RQC2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Usp42B2RQC2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.81■□□□□ 0.92
Usp42B2RQC2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.81■□□□□ 0.92
Usp42B2RQC2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp42B2RQC2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.81■□□□□ 0.92
Usp42B2RQC2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp42B2RQC2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp42B2RQC2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp42B2RQC2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp42B2RQC2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp42B2RQC2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp42B2RQC2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp42B2RQC2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp42B2RQC2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Usp42B2RQC2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Usp42B2RQC2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp42B2RQC2 Gm43183-201ENSMUST00000200632 547 ntBASIC20.8■□□□□ 0.92
Usp42B2RQC2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp42B2RQC2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Usp42B2RQC2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Usp42B2RQC2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp42B2RQC2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp42B2RQC2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp42B2RQC2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Usp42B2RQC2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp42B2RQC2 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.8■□□□□ 0.92
Usp42B2RQC2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp42B2RQC2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms