Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gm12887B1AVM1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.44□□□□□ -0.1
Gm12887B1AVM1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm12887B1AVM1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Gm43137-201ENSMUST00000198052 594 ntBASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm12887B1AVM1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Gm12922-201ENSMUST00000120626 809 ntBASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm12887B1AVM1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms