Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd6A3KFM7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd6A3KFM7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd6A3KFM7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd6A3KFM7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd6A3KFM7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd6A3KFM7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.53□□□□□ -0.08
Chd6A3KFM7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd6A3KFM7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd6A3KFM7 Gm12895-201ENSMUST00000122214 226 ntBASIC14.53□□□□□ -0.08
Chd6A3KFM7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.53□□□□□ -0.08
Chd6A3KFM7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.53□□□□□ -0.08
Chd6A3KFM7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd6A3KFM7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd6A3KFM7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chd6A3KFM7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd6A3KFM7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.53□□□□□ -0.08
Chd6A3KFM7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd6A3KFM7 Gm4995-201ENSMUST00000117247 432 ntBASIC14.53□□□□□ -0.08
Chd6A3KFM7 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.53□□□□□ -0.08
Chd6A3KFM7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.53□□□□□ -0.08
Chd6A3KFM7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd6A3KFM7 Gm10566-201ENSMUST00000086739 996 ntBASIC14.53□□□□□ -0.08
Chd6A3KFM7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Chd6A3KFM7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd6A3KFM7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd6A3KFM7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Chd6A3KFM7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd6A3KFM7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd6A3KFM7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chd6A3KFM7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.52□□□□□ -0.08
Chd6A3KFM7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd6A3KFM7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chd6A3KFM7 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.52□□□□□ -0.09
Chd6A3KFM7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd6A3KFM7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd6A3KFM7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.52□□□□□ -0.09
Chd6A3KFM7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd6A3KFM7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd6A3KFM7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd6A3KFM7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.52□□□□□ -0.09
Chd6A3KFM7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd6A3KFM7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd6A3KFM7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chd6A3KFM7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.51□□□□□ -0.09
Chd6A3KFM7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.51□□□□□ -0.09
Chd6A3KFM7 Gm43767-201ENSMUST00000198933 381 ntBASIC14.51□□□□□ -0.09
Chd6A3KFM7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chd6A3KFM7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Chd6A3KFM7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chd6A3KFM7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chd6A3KFM7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chd6A3KFM7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chd6A3KFM7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.51□□□□□ -0.09
Chd6A3KFM7 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.51□□□□□ -0.09
Chd6A3KFM7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chd6A3KFM7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.51□□□□□ -0.09
Chd6A3KFM7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Chd6A3KFM7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chd6A3KFM7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chd6A3KFM7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.5□□□□□ -0.09
Chd6A3KFM7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Chd6A3KFM7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Mir5126-201ENSMUST00000175513 77 ntBASIC14.5□□□□□ -0.09
Chd6A3KFM7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Chd6A3KFM7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chd6A3KFM7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Chd6A3KFM7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.49□□□□□ -0.09
Chd6A3KFM7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Chd6A3KFM7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chd6A3KFM7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chd6A3KFM7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.49□□□□□ -0.09
Chd6A3KFM7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chd6A3KFM7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chd6A3KFM7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chd6A3KFM7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.49□□□□□ -0.09
Chd6A3KFM7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chd6A3KFM7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Chd6A3KFM7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms