Protein–RNA interactions for Protein: A0A1W2P8B8

Gm12248, MCG23049, mousemouse

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12248A0A1W2P8B8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm12248A0A1W2P8B8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm12248A0A1W2P8B8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm12248A0A1W2P8B8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm12248A0A1W2P8B8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gm12248A0A1W2P8B8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm12248A0A1W2P8B8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm12248A0A1W2P8B8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm12248A0A1W2P8B8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Gm12248A0A1W2P8B8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm12248A0A1W2P8B8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 Gm12441-201ENSMUST00000121806 588 ntBASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm12248A0A1W2P8B8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm12248A0A1W2P8B8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.81■□□□□ 0.44
Gm12248A0A1W2P8B8 Mir2861-201ENSMUST00000175539 82 ntBASIC17.81■□□□□ 0.44
Gm12248A0A1W2P8B8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm12248A0A1W2P8B8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm12248A0A1W2P8B8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm12248A0A1W2P8B8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm12248A0A1W2P8B8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm12248A0A1W2P8B8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Gm11249-201ENSMUST00000117071 859 ntBASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Gm29257-201ENSMUST00000186115 639 ntBASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm12248A0A1W2P8B8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Gm27275-201ENSMUST00000184318 272 ntBASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Gm20049-201ENSMUST00000219950 730 ntBASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm12248A0A1W2P8B8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm12248A0A1W2P8B8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm12248A0A1W2P8B8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.78■□□□□ 0.44
Gm12248A0A1W2P8B8 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.78■□□□□ 0.44
Gm12248A0A1W2P8B8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm12248A0A1W2P8B8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm12248A0A1W2P8B8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm12248A0A1W2P8B8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm12248A0A1W2P8B8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms