Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28729A0A1B0GSW2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Gm28729A0A1B0GSW2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Gm45058-201ENSMUST00000205810 766 ntBASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28729A0A1B0GSW2 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 Gm21362-201ENSMUST00000194272 928 ntBASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 Gm18032-201ENSMUST00000222541 538 ntBASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28729A0A1B0GSW2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.41■□□□□ 0.38
Gm28729A0A1B0GSW2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28729A0A1B0GSW2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28729A0A1B0GSW2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Gm28729A0A1B0GSW2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.41■□□□□ 0.38
Gm28729A0A1B0GSW2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.41■□□□□ 0.38
Gm28729A0A1B0GSW2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28729A0A1B0GSW2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28729A0A1B0GSW2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28729A0A1B0GSW2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28729A0A1B0GSW2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28729A0A1B0GSW2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28729A0A1B0GSW2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Gm23634-201ENSMUST00000175071 91 ntBASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28729A0A1B0GSW2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Gm28729A0A1B0GSW2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Gm28729A0A1B0GSW2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Mir5130-201ENSMUST00000175160 84 ntBASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28729A0A1B0GSW2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm2274-201ENSMUST00000184539 609 ntBASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm7367-201ENSMUST00000057611 492 ntBASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Fst-202ENSMUST00000223640 2612 ntBASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms