Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lnp1A0A1B0GSK3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lnp1A0A1B0GSK3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lnp1A0A1B0GSK3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lnp1A0A1B0GSK3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lnp1A0A1B0GSK3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lnp1A0A1B0GSK3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lnp1A0A1B0GSK3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lnp1A0A1B0GSK3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Lnp1A0A1B0GSK3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lnp1A0A1B0GSK3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Gm2399-201ENSMUST00000104944 225 ntBASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lnp1A0A1B0GSK3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lnp1A0A1B0GSK3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Lnp1A0A1B0GSK3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lnp1A0A1B0GSK3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lnp1A0A1B0GSK3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lnp1A0A1B0GSK3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lnp1A0A1B0GSK3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lnp1A0A1B0GSK3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lnp1A0A1B0GSK3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms