Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv13-2A0A140T8N6 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-2A0A140T8N6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-2A0A140T8N6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.43
Trbv13-2A0A140T8N6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.4□□□□□ -0.43
Trbv13-2A0A140T8N6 Flg-201ENSMUST00000050758 1488 ntBASIC12.4□□□□□ -0.43
Trbv13-2A0A140T8N6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.39□□□□□ -0.43
Trbv13-2A0A140T8N6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms