Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Atg4a-psA0A0G2JFS9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atg4a-psA0A0G2JFS9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.7■■□□□ 1.06
Atg4a-psA0A0G2JFS9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.7■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Gm29791-202ENSMUST00000207888 369 ntBASIC21.7■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Gm13401-201ENSMUST00000117074 291 ntBASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Gm5643-201ENSMUST00000117081 966 ntBASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.66■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.65■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atg4a-psA0A0G2JFS9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.65■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Atg4a-psA0A0G2JFS9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Atg4a-psA0A0G2JFS9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.64■■□□□ 1.05
Atg4a-psA0A0G2JFS9 Gm18025-201ENSMUST00000221733 862 ntBASIC21.64■■□□□ 1.05
Atg4a-psA0A0G2JFS9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms