Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Mir6982-201ENSMUST00000184354 68 ntBASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V3A0A0G2JEW2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gm10418-201ENSMUST00000100943 576 ntBASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Mir5122-201ENSMUST00000175004 89 ntBASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gm37055-201ENSMUST00000191866 133 ntBASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Gm29791-202ENSMUST00000207888 369 ntBASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V3A0A0G2JEW2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms