Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Dio3-201ENSMUST00000097228 1449 ntBASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm2399-201ENSMUST00000104944 225 ntBASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm18666-201ENSMUST00000190039 958 ntBASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms