Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9-4A0A0B4J1K2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gm12527-201ENSMUST00000117967 564 ntBASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Zfp783-201ENSMUST00000095946 670 ntBASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Grk6-206ENSMUST00000224995 2971 ntBASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav9-4A0A0B4J1K2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gm38285-201ENSMUST00000192928 922 ntBASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav9-4A0A0B4J1K2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gm11249-201ENSMUST00000117071 859 ntBASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gm37856-201ENSMUST00000191634 999 ntBASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Trmt13-210ENSMUST00000198454 880 ntBASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Mtag2-201ENSMUST00000058665 714 ntBASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9-4A0A0B4J1K2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Gm10653-202ENSMUST00000139570 835 ntBASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9-4A0A0B4J1K2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms